Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2979 |
Symbol | |
ID | 4256290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3530477 |
End bp | 3531727 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638123656 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_739020 |
Protein GI | 114048470 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000079724 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0360054 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAATTT ATTTAGTGGG CGGAGCTGTA CGAGACAGCC TGCTCAATCT CCCTATAAAA GATAAAGATT TTATGGTTGT CGGCGCCACT CCGGAGCAAA TGCAGCAGTT AGGCTATCGC CAGGTGGGTA AAGACTTCCC GGTCTTTTTG CACCCTAAAA CCCAACAAGA ATATGCATTA GCACGCACAG AGCGCAAAGT CGGCCTCGGC TATGGTGGCT TCAGCTGTTA CGCCAGTCCG GATGTCACCC TAGAGCAAGA CCTGCTGAGA CGCGATTTAA CCATTAATGC CATAGCTCAA GATGAGGCGG GTAATTTACA CGATCCTTTT CATGGTATCG CGGACATAGA GGCACGACAG CTGCGGCATG TTTCGGCAGC CTTTTCAGAA GATCCACTGA GAGTATTACG GGTTGCCCGT TTTGCCGCAC GTTTTCATGG ATTAGGTTTC GAGATTGCCC CAGAAACCAT GGCGTTAATG CAGCACATGA GTCAAACCGA AGAGTTAACC GCACTCACGC CTGAACGCGT CTGGCAAGAA GTCGATAAGA GTCTTGGCGG TCCTCACCCA GAAGTCTTCT TCGAAGTGCT ACGCCAATGT GGCGCCTTGA AAGTCCTCTT TCCCGAGATT GATGCGCTGT TTGGCGTCCC TCAGCCTGAA AAATGGCACC CAGAAATAGA TACGGGTTTG CACACTATGA TGGTATTAGC CCAGTCCTCA TCCATGACAG AGGAAAAAGC CGTGCGCTTC GCCGCCTTAG TGCACGATCT AGGTAAAGCA TTAAGCCCCA AAGAACACTG GCCTAAACAC CATGGCCATG GGCAAAAAGG ACTGCCAGTG ATTAAAAGCC TGTGTGAACG GCTGCGCGTG CCCAATGAGT ATCGGGATCT AGCGCTTTTG GTAAGCGATC AACATCAGAA TGTGCACCAA GCTTTTGAGT TAAGGAGCGA AACCATCATT AAACTGTTCG ATAAAGCCGA TTTTTGGCGT AAACCCGAAC GACTAAAGCA ACTTCTATTA GCCTGTATCG CCGATATGCG TGGTCGAACG GGATTCGAAC ATCAACCTTA CCCACAGAGC GACTACCTCA ATGCGTGTTT TTTAGCCGCC AATAATGTTG ATGTAAAGGC AATCATTGCT GCAGGTTTTC AAGGTGCACA GATAAAACAA GCGCTCAATT CGAAGCGGAT AGAGGTTGTT GAGCAAGTGA AACTTAACTG GCAGCAATCC CAAGCCAAAC AAACGCCATA A
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Protein sequence | MKIYLVGGAV RDSLLNLPIK DKDFMVVGAT PEQMQQLGYR QVGKDFPVFL HPKTQQEYAL ARTERKVGLG YGGFSCYASP DVTLEQDLLR RDLTINAIAQ DEAGNLHDPF HGIADIEARQ LRHVSAAFSE DPLRVLRVAR FAARFHGLGF EIAPETMALM QHMSQTEELT ALTPERVWQE VDKSLGGPHP EVFFEVLRQC GALKVLFPEI DALFGVPQPE KWHPEIDTGL HTMMVLAQSS SMTEEKAVRF AALVHDLGKA LSPKEHWPKH HGHGQKGLPV IKSLCERLRV PNEYRDLALL VSDQHQNVHQ AFELRSETII KLFDKADFWR KPERLKQLLL ACIADMRGRT GFEHQPYPQS DYLNACFLAA NNVDVKAIIA AGFQGAQIKQ ALNSKRIEVV EQVKLNWQQS QAKQTP
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