Gene Shewmr7_2979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2979 
Symbol 
ID4256290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3530477 
End bp3531727 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content49% 
IMG OID638123656 
Productmetal dependent phosphohydrolase 
Protein accessionYP_739020 
Protein GI114048470 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000079724 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0360054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAATTT ATTTAGTGGG CGGAGCTGTA CGAGACAGCC TGCTCAATCT CCCTATAAAA 
GATAAAGATT TTATGGTTGT CGGCGCCACT CCGGAGCAAA TGCAGCAGTT AGGCTATCGC
CAGGTGGGTA AAGACTTCCC GGTCTTTTTG CACCCTAAAA CCCAACAAGA ATATGCATTA
GCACGCACAG AGCGCAAAGT CGGCCTCGGC TATGGTGGCT TCAGCTGTTA CGCCAGTCCG
GATGTCACCC TAGAGCAAGA CCTGCTGAGA CGCGATTTAA CCATTAATGC CATAGCTCAA
GATGAGGCGG GTAATTTACA CGATCCTTTT CATGGTATCG CGGACATAGA GGCACGACAG
CTGCGGCATG TTTCGGCAGC CTTTTCAGAA GATCCACTGA GAGTATTACG GGTTGCCCGT
TTTGCCGCAC GTTTTCATGG ATTAGGTTTC GAGATTGCCC CAGAAACCAT GGCGTTAATG
CAGCACATGA GTCAAACCGA AGAGTTAACC GCACTCACGC CTGAACGCGT CTGGCAAGAA
GTCGATAAGA GTCTTGGCGG TCCTCACCCA GAAGTCTTCT TCGAAGTGCT ACGCCAATGT
GGCGCCTTGA AAGTCCTCTT TCCCGAGATT GATGCGCTGT TTGGCGTCCC TCAGCCTGAA
AAATGGCACC CAGAAATAGA TACGGGTTTG CACACTATGA TGGTATTAGC CCAGTCCTCA
TCCATGACAG AGGAAAAAGC CGTGCGCTTC GCCGCCTTAG TGCACGATCT AGGTAAAGCA
TTAAGCCCCA AAGAACACTG GCCTAAACAC CATGGCCATG GGCAAAAAGG ACTGCCAGTG
ATTAAAAGCC TGTGTGAACG GCTGCGCGTG CCCAATGAGT ATCGGGATCT AGCGCTTTTG
GTAAGCGATC AACATCAGAA TGTGCACCAA GCTTTTGAGT TAAGGAGCGA AACCATCATT
AAACTGTTCG ATAAAGCCGA TTTTTGGCGT AAACCCGAAC GACTAAAGCA ACTTCTATTA
GCCTGTATCG CCGATATGCG TGGTCGAACG GGATTCGAAC ATCAACCTTA CCCACAGAGC
GACTACCTCA ATGCGTGTTT TTTAGCCGCC AATAATGTTG ATGTAAAGGC AATCATTGCT
GCAGGTTTTC AAGGTGCACA GATAAAACAA GCGCTCAATT CGAAGCGGAT AGAGGTTGTT
GAGCAAGTGA AACTTAACTG GCAGCAATCC CAAGCCAAAC AAACGCCATA A
 
Protein sequence
MKIYLVGGAV RDSLLNLPIK DKDFMVVGAT PEQMQQLGYR QVGKDFPVFL HPKTQQEYAL 
ARTERKVGLG YGGFSCYASP DVTLEQDLLR RDLTINAIAQ DEAGNLHDPF HGIADIEARQ
LRHVSAAFSE DPLRVLRVAR FAARFHGLGF EIAPETMALM QHMSQTEELT ALTPERVWQE
VDKSLGGPHP EVFFEVLRQC GALKVLFPEI DALFGVPQPE KWHPEIDTGL HTMMVLAQSS
SMTEEKAVRF AALVHDLGKA LSPKEHWPKH HGHGQKGLPV IKSLCERLRV PNEYRDLALL
VSDQHQNVHQ AFELRSETII KLFDKADFWR KPERLKQLLL ACIADMRGRT GFEHQPYPQS
DYLNACFLAA NNVDVKAIIA AGFQGAQIKQ ALNSKRIEVV EQVKLNWQQS QAKQTP