Gene Shewmr7_2887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2887 
Symbol 
ID4255721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3424404 
End bp3424874 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content45% 
IMG OID638123564 
Productpeptidylprolyl isomerase, FKBP-type 
Protein accessionYP_738928 
Protein GI114048378 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATGT TACTTGCCGT TGTTGTGATT GCTGGGGTGA TTTTTTACTT CTTTACCTCG 
ATGAATAACC AAAAAGCGGC CCAAGAAAAT ATCCGTTTAG GTAATGAGTT TTTAGCGCAA
AACAAAAACC AAGAAGGGGT GAAAACCACC GCCTCTGGGT TGCAATATCA AGTGTTACAG
CAAGGAACTG GTACTGTTCA TCCGAAGGCG AGTGATACTG TGACTGTGCA TTATCACGGC
ACTTTAATTG ATGGAACCGT ATTCGATAGC TCGGTCGAGC GCGGAGAACC CATTGCCTTC
CCACTCAATC GGGTGATTAA AGGCTGGACC GAAGGCGTAC AACTGATGGT TGAAGGCGAC
AAGTATCGCT TCTTTATTCC TAGCGAACTG GCCTACGGCA ATCGCAGCAC AGGCAAAATT
GGCGGTGGTT CGGTACTGAT TTTTGATGTT GAGCTGCTAA AGGTAAATTA A
 
Protein sequence
MKMLLAVVVI AGVIFYFFTS MNNQKAAQEN IRLGNEFLAQ NKNQEGVKTT ASGLQYQVLQ 
QGTGTVHPKA SDTVTVHYHG TLIDGTVFDS SVERGEPIAF PLNRVIKGWT EGVQLMVEGD
KYRFFIPSEL AYGNRSTGKI GGGSVLIFDV ELLKVN