Gene Shewmr7_2867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2867 
Symbol 
ID4257539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3400574 
End bp3403039 
Gene Length2466 bp 
Protein Length821 aa 
Translation table11 
GC content49% 
IMG OID638123544 
ProductEcoEI R domain-containing protein 
Protein accessionYP_738908 
Protein GI114048358 
COG category[V] Defense mechanisms 
COG ID[COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGATA GTGGAAGCCT ACTAATGCAA AAAGCCTTGT TAACTGAAGC CGATATCGTC 
TCCAAGTTCA TTTTACCAGC CATCAAGCAA GCAGGATGGA ACGATATGAC ACAAATCCGT
CAAGAGGTAA AACTTCGAGA TGGTAAAGTG ATTGTTCGTG GTCAGGTTGC AGCAAGGCGA
AAAGTAAAAT CAGCCGACAT AGTGCTCTAT CACAAGCCAT CCATGCCACT GGCTGTCATA
GAGGCCAAGG CCAACAAGCA TGAAATTGGC AAGGGAATGC AACAAGGGCT GGATTATGCC
GCCTTACTGG AAGTGCCATT TATATTTGCG TCAAACGGAG ATGGTTTCGT TTTTCACGAT
AAAACCAATC CTCTAGCACT CGAAACCACT ATCACCCTCG AAGATTTCCC CACACCGGCG
CAGCTGTGGG ACAAGTACTG CACTTGGAAG GGATACAAGA CAGAGCATTT GCCGGTTATC
ACACAGGATT ATTATCCTGA CAGCAACGGT AAGGCGCCGC GCTATTATCA GCTTCAAGCC
ATCAATAAAA CCGTTGAGGC TGTTGCAGCA GGGCAGGACA GAGTGCTTTT AGTTATGGCA
ACTGGCACAG GGAAAACATA CACAGCCTTT CAAATCATCT GGCGCTTGTG GAAGTCCCGC
GCTAAAAAAC GCATCCTGTT TCTTGCTGAC CGCAACATCC TAGTCGATCA AACTAAAACC
AATGATTTTC AACCCTTTGG TACGTCCATG ACCAAGGTTA CTGGCAGAAC TGTAGACCCA
GCCTACGAAA TACATCTCGC GCTTTATCAG GCGCTAACAG GCCCAGAAGA AAGCCAAAAA
GCGTATAAAC AAGTTGCGCC AGATTTCTTC GATCTTATTG TTGTTGATGA GTGTCACCGC
GGCAGTGCCG CCGAAGACAG TGCCTGGCGT GAAATACTCG AATATTTCTC CGCTGCGACT
CAAATTGGCC TTACTGCTAC CCCCAAAGAA ACCGATGAAG TCTCCAACAC CGAATACTTT
GGTGATCCTG TGTATACCTA TTCACTCAAG CAGGGCATTG AGGACGGGTT CCTTGCGCCA
TACAAGGTGA TCCGCGTCGA TATTGATGTG GACGTTCAGG GATGGCGCCC AAACAAAGGC
CAATTGGATA AAGCTGGGCA CGAAATCGAA GACCGCATCT ACAACCAAAA GGATATGGAC
CGCACTCTGG TCATTGATGA GCGAACTGAA CTGGTCGCTA AAACCATCAC CCAATATTTG
CAGCGCACCG ACCCCATGGC CAAAACCATA GTGTTCTGTA ATGACATCGA TCATGCGGAA
CGCATGCGCC GCGCCTTGGT AAACCTCAAT CCTAAGCAAG TGGCCAAAAA CGATAAATAC
ATCATGAAGA TCACCGGTGA TGATGAAATC GGCAAAGGCC AATTGGATAA CTTCATCAAT
CCCAAAAAAG CCTATCCGGT CATTGCCACT ACCTCAGAGC TGATGACCAC CGGCGTCGAT
GCCAAAACCT GTAAGCTGGT GGTGCTCGAC CAATCCATCC AGTCAATGAC CAAGTTCAAG
CAAATCATCG GCCGTGGCAC CCGCATTGAC GACAGATACA ACAAATTGTG GTTCACCATT
CTCGATTTCA AAAAGGCTAC TGAACTCTTT GCCGACGAGC GCTTCGATGG TACCCCCGAG
CGGGTTAAGC AGGTCAAGCC AGAGGACTTC GACACCGAAG AAGGTTTAAA CAACATCTCT
GAAGACGATA TTGATGCAAC CAGTGGCGAT CCGACCTCAA TCTTTGATGG TGAGGATATC
GATCCTGGCT CGATTCAGGA GCCGCCATCC AGCTATCAGA TGGGGGCAGG CAATAACAAG
CAGGGCAATG ATAGTGATTG GGAAAGCGAA GATAAAGTCC GCAAATTCCA TGTTAACGGC
GTGGCCGTAA AAGCGCTGGC GGAGCGGGTA CAGTATTACG ACACTGACGG CAAACTGGTT
ACCGAGTCAT TTAAAGATTA CACCCGTAAA ACCCTGTCTA AACAGTTTGC CTCTATGGAC
GAGTTTATCA AGCGCTGGCA TGGCGCCGAG CGTAAGCAGG CCGTCATAGA AGAACTGGCA
ACTCTGGGGA TCGTCTGGGA GCTCTTGGAG CAAGAGGTCG GCAAAGAAAT GGACCCCTTC
GACCTTATTT GCCATGTGGT GTATGACCAA CCGCCACTCA CCCGCCGCGA GCGTGCCGAG
CAGGTGAAAA AGCGCAACTA TTTCACCAAA TACTCAGATA CCGCCCAGCA AGTGCTCCAA
AGCCTACTTG ATAAGTATGC CGACGCCGGA GTACAGGAGA TTGAAAACCG TCAGGTATTG
AAGGTCGCCC CCTTTACTGA GTTGGGACGC CCTATGGAAA TTGTGAAAAA GAGCTTTGGG
GATGTCGCTG ATTACGAGCA GGCTATCAGC GAACTTGAGG CCGCTATCTA TCAATCGGTG
GGGTAA
 
Protein sequence
MDDSGSLLMQ KALLTEADIV SKFILPAIKQ AGWNDMTQIR QEVKLRDGKV IVRGQVAARR 
KVKSADIVLY HKPSMPLAVI EAKANKHEIG KGMQQGLDYA ALLEVPFIFA SNGDGFVFHD
KTNPLALETT ITLEDFPTPA QLWDKYCTWK GYKTEHLPVI TQDYYPDSNG KAPRYYQLQA
INKTVEAVAA GQDRVLLVMA TGTGKTYTAF QIIWRLWKSR AKKRILFLAD RNILVDQTKT
NDFQPFGTSM TKVTGRTVDP AYEIHLALYQ ALTGPEESQK AYKQVAPDFF DLIVVDECHR
GSAAEDSAWR EILEYFSAAT QIGLTATPKE TDEVSNTEYF GDPVYTYSLK QGIEDGFLAP
YKVIRVDIDV DVQGWRPNKG QLDKAGHEIE DRIYNQKDMD RTLVIDERTE LVAKTITQYL
QRTDPMAKTI VFCNDIDHAE RMRRALVNLN PKQVAKNDKY IMKITGDDEI GKGQLDNFIN
PKKAYPVIAT TSELMTTGVD AKTCKLVVLD QSIQSMTKFK QIIGRGTRID DRYNKLWFTI
LDFKKATELF ADERFDGTPE RVKQVKPEDF DTEEGLNNIS EDDIDATSGD PTSIFDGEDI
DPGSIQEPPS SYQMGAGNNK QGNDSDWESE DKVRKFHVNG VAVKALAERV QYYDTDGKLV
TESFKDYTRK TLSKQFASMD EFIKRWHGAE RKQAVIEELA TLGIVWELLE QEVGKEMDPF
DLICHVVYDQ PPLTRRERAE QVKKRNYFTK YSDTAQQVLQ SLLDKYADAG VQEIENRQVL
KVAPFTELGR PMEIVKKSFG DVADYEQAIS ELEAAIYQSV G