| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2833 |
|---|
| Symbol | glgC |
|---|
| ID | 4255878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 3358100 |
|---|
| End bp | 3359362 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638123510 |
|---|
| Product | glucose-1-phosphate adenylyltransferase |
|---|
| Protein accession | YP_738874 |
|---|
| Protein GI | 114048324 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0448] ADP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR02091] glucose-1-phosphate adenylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAATG TACGTTATAT CAGTAATTTA ACTCGTGAAA CCTATGCATT GATTCTGGCT
GGTGGCCGAG GCTCGCGTTT ACATGAACTC ACCGACTGGC GCGCTAAACC CGCGCTGTAT
TTCGGGGGTA AGTTTAGGAT CATCGATTTT CCGCTGTCGA ATTGCATCAA CTCGGGGATC
CGCCGCGTTG GGGTGGTGAC CCAATATAAG TCGCACTCGT TAATTCGCCA CGTGATGCGC
GGTTGGGGCC ACTTTAAGAA GGAATTAGGT GAGTCGGTGG AGATTCTACC CGCCTCACAA
CGTTACTCTG AGAATTGGTA TCAGGGCACG GCCGATGCGG TATTTCAAAA TATTGATATC
ATCCGCCATG AGTTGCCTAA GTATGTGATG GTGCTCTCGG GTGATCATGT GTATCGCATG
GATTACGCTG GCTTACTGGC CGCCCATGCC GAATCCGGCG CCGATATGAC AGTCTCCTGC
CTCGAGGTGC CCGTGGCCGA AGCGGCGGGC GCATTTGGGG TGATGGAAGT CGATGACGAG
ATGCGCATCC TAGGATTTGA AGAAAAACCT AAGCATCCTA AACACTCCCC TGGCAACCCT
GAGAAGTGCC TCGCCTCGAT GGGCAACTAT GTGTTTAACA CTGAATTTTT GTTCGATCAG
TTGAAGAAAG ACGCGCAAAA CGCCAATTCC GATCGCGATT TTGGCAAAGA TATTATTCCC
TCGATCATCG AAAAACATAA AGTGTTTGCC TATCCCTTTA AGAGCGCCTT CCCCAACGAG
CAAGCCTACT GGCGCGATGT GGGCACCTTG GATTCCTTCT GGCAGGCCAA TATGGAATTG
CTATCGCCCA CGCCCGCCTT AAACCTCTAC GATGCCAAGT GGCCGATTTG GACCTATCAG
GAGCAATTAC CTCCCGCTAA GTTTGTGTTC GACGATGACG ATAGACGCGG CATGGCGGTG
GATTCGATTA TATCCGGCGG CTGTATTATC TCGGGGGCGA CCGTGCGCCG CAGTGTATTG
TTTAACGAGG TGCGGGTTTG TTCCTACTCA GTGGTTGAGG ATTCGGTTGT GCTGCCCGAT
GTGGTGGTGC TACGCCACTG TAAGATTAAA AACGCCATCA TCGACAGGGG CTGCATCATC
CCCGAAGGCA CAGTGATTGG TTATAACCAC GACCATGACA GGGCAAAGGG CTTTAGGGTG
TCCGAGAAGG GCATCACCTT AGTCACCCGC GATATGTTAG GGCTGCCCGT GGGCTATGAG
TAA
|
|---|
| Protein sequence | MSNVRYISNL TRETYALILA GGRGSRLHEL TDWRAKPALY FGGKFRIIDF PLSNCINSGI
RRVGVVTQYK SHSLIRHVMR GWGHFKKELG ESVEILPASQ RYSENWYQGT ADAVFQNIDI
IRHELPKYVM VLSGDHVYRM DYAGLLAAHA ESGADMTVSC LEVPVAEAAG AFGVMEVDDE
MRILGFEEKP KHPKHSPGNP EKCLASMGNY VFNTEFLFDQ LKKDAQNANS DRDFGKDIIP
SIIEKHKVFA YPFKSAFPNE QAYWRDVGTL DSFWQANMEL LSPTPALNLY DAKWPIWTYQ
EQLPPAKFVF DDDDRRGMAV DSIISGGCII SGATVRRSVL FNEVRVCSYS VVEDSVVLPD
VVVLRHCKIK NAIIDRGCII PEGTVIGYNH DHDRAKGFRV SEKGITLVTR DMLGLPVGYE
|
|---|
| |