Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2825 |
Symbol | |
ID | 4255870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3345331 |
End bp | 3346683 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638123502 |
Product | multi anti extrusion protein MatE |
Protein accession | YP_738866 |
Protein GI | 114048316 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCTA TTTCCCATAG CGCAACGGAT CAACGCCTGC TACAAGAGCC GATTTCAAAG CTTTTCTGGC GCTATACCAT TCCAACGATC GCCTCCATGT TGGTGACTGG GGTGTATGTC ACTATTGATG GTATCTTTGT CGGCCATTAT CTCGGTGAAA CTGGGCTGGC GGGCATGATG CTGGCCTATC CCGTGGGCGC GATTCTGTAC GCAGTCGGTG CCATGATTGG CATGGGCAGC GCGGCGTTAG TCTCGATTAA CTTAGGACAA GGTAATGTCG CCAAGGCGCG CAAGTTGCTC GGCAATGCCT TTAGTTTATG TTTACTGGCG GGGGCGTTTT TTGCCTTAGT CGGCGGGATC TTTTCTCGGG ATATTTTAAT TGCCCTCGGC GCCGAGGGGG AGATACTCGA AAACGCTAAC GAATACCTGT TCTGGTATTT TGCCTTATGT CATTTCCCTA TTATTTCAAT GGCATTTACC ACCTTGCTGC GTAACGATGG TCGCCCATCT ATGGTGACCT TTGTGCTGAT CTTAGGTGGC GTGCTGAACA CCTTTTTAGA TTGGCTGTTT ATTGTGGTGT TTCCCTTCGG CTTGGCCGGG GCGGCGATTG CCACCATGTT GTCGCAGGCC GTGACTGGGC TGCTCTGTTT GCAGCATTTC TTTGGGGCGC GCACTCAGCT CAAAATCAAT CTTGAGCAGA TGAAGCTAAA GCTCGACAAC TGCCTCAATA TTGCCCGTGT TGGCCTGCCA AGCTTTTTGA TGAACCTGTA TTTGTCGATC GTATTGACCC TGCATAACAC CGCATTTTTA TGGGTCGGTG GCCCTCTGCA TGTGGCGGCA TACGGGGTTG TGAGTTACAC CGAAGCGTTT TTCTATCTGA TTTTTGAAGG CATTGCCCTC GGTACTCAAC CTATTTATAG CTTTAATGCT GGGGCAGGGC GCTTCGACAG GGTTAAGCAG GCACGTAATA TCGCCTTTGG CATGACCCTA CTCACCGCTG CACTTGGCTT AGTGTTGATT TATTCCCGCC CCGAATGGTT GGTATACCTG TTTGCCGGTG ATAACCCAAG CTTAACGCCG GTCGCGATTG AAGGAATGCG TTGGTATTTC TGGGGCTTAC CTATGGAAGG CTTGATTCTT GTGGGCGCCA GTTTCTTCCA GGCGATTAAC TGTGCTAAGC AGGCATCGAT ACTCACTGGG GCGAAACTGC TGCTTATCGC TGCCATTATC TATTGTTTTG CTTGGGCCTT TGGCGTAATA GGCGTGTGGG TGTCGCTCGC GACCTGTAGC ACTATGCTGG TGATTTGGAT GTTTATCGCA ATGGGGCGGC TTCAAGTGAA CGCTAAAGTC TGA
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Protein sequence | MTAISHSATD QRLLQEPISK LFWRYTIPTI ASMLVTGVYV TIDGIFVGHY LGETGLAGMM LAYPVGAILY AVGAMIGMGS AALVSINLGQ GNVAKARKLL GNAFSLCLLA GAFFALVGGI FSRDILIALG AEGEILENAN EYLFWYFALC HFPIISMAFT TLLRNDGRPS MVTFVLILGG VLNTFLDWLF IVVFPFGLAG AAIATMLSQA VTGLLCLQHF FGARTQLKIN LEQMKLKLDN CLNIARVGLP SFLMNLYLSI VLTLHNTAFL WVGGPLHVAA YGVVSYTEAF FYLIFEGIAL GTQPIYSFNA GAGRFDRVKQ ARNIAFGMTL LTAALGLVLI YSRPEWLVYL FAGDNPSLTP VAIEGMRWYF WGLPMEGLIL VGASFFQAIN CAKQASILTG AKLLLIAAII YCFAWAFGVI GVWVSLATCS TMLVIWMFIA MGRLQVNAKV
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