Gene Shewmr7_2793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2793 
Symbol 
ID4258408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3310777 
End bp3311169 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content53% 
IMG OID638123471 
Producthypothetical protein 
Protein accessionYP_738835 
Protein GI114048285 
COG category[S] Function unknown 
COG ID[COG2363] Uncharacterized small membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00315578 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0579886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAAG GATTGTTGTT ACTCGCCGCG GTAAGCGGAT TTTTTGCGGT TGCGCTAGGC 
GCTTTTGGTG CCCATGGACT CAAGGCTGTC GCGCCGCCTG AGCTGATTGA GGTGTTTAAT
CTGGGGGTGC AATATCACTT CTATCATACC TTTGCGCTGA TTGCCGTGGC CTTTGCCGGG
CAGTGGTTAA CCTCGCGTTT GCTGGACTGG GCGGCCTATT TGTTTATGGC GGGCATAGTG
CTGTTTTCTG GCTCGCTTTA CGGTTTAGCG CTGGTTGGTA GCAAATGGTT AGGCCCTATT
ACCCCAATGG GCGGTGGCTG TTTCCTCTTA GGTTGGTTAT TGCTGGCCGC GGCCGTATGG
CGCCATAAAG TGGTGGATGG TAACGAGTCA TAA
 
Protein sequence
MRKGLLLLAA VSGFFAVALG AFGAHGLKAV APPELIEVFN LGVQYHFYHT FALIAVAFAG 
QWLTSRLLDW AAYLFMAGIV LFSGSLYGLA LVGSKWLGPI TPMGGGCFLL GWLLLAAAVW
RHKVVDGNES