Gene Shewmr7_2792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2792 
Symbol 
ID4258407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3309538 
End bp3310623 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content50% 
IMG OID638123470 
Productputative RNA 2'-O-ribose methyltransferase 
Protein accessionYP_738834 
Protein GI114048284 
COG category[R] General function prediction only 
COG ID[COG2933] Predicted SAM-dependent methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000590307 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0659937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACC TATTTTTATT TTGCCGTGCA GGCTATGAGA AAGAATGCGC AGCAGAAATC 
CAACAGCGAG CCGCCGAGCT CAATGTGGGT GGCTTTGTTA AGGCCAACAA CAACGATGCC
TACGTGGTAT ATCAATGTTT TGAAGAAGAC GGCGGCGATA TCTTAGTGAA GCAACTGCCG
TTGGATTCAC TGATTTTTGC CCGTCAGATG TTTGCCGCAA GCGAACTGTT GGCGGATTTA
CCCGAGTCTG ATCGTGTCAG CCCGATTGTG GCGGCGCTCA GTGACGTGAG TAAAGCGGGT
GAGCTGAGGG TAGAAACCCC TGACACCAAC GAAGCGAAAG AACTGTCGGC ATTTTGCCGT
AAGTTTACCG TGCCTTTGCG CCAGCATTTG AAAAAATCCG GCAGTTTACT GGCGCAAGAA
AATCCTAAGC GTCCGATTAT CCACGTCTGT TTTATCGGCC CAGGTCGCGC CTACGTAGGT
TATTCCTTCA GTAACAACAG CTCACCCTAT TTTATGGGGA TCCCGCGCCT GAAAATGGCT
GCCGATGCAC CGAGTCGCTC AAGCCTGAAA CTCGATGAGG CATTTGCGCA GTTTGTGCCT
AAAGAAGAGC AGGAAGAACG GGTTCGCAGC GGCATGAATG CGGTGGACTT AGGCGCTTGC
CCAGGTGGCT GGACCTATCA GTTAGTGCGT CGTGGCATGA TGGTCTCCGC GGTCGATAAT
GGCCCAATGA ACGAAAAGCT GATGGAAACC GGACAAGTGA AACATTTCCG TGAGGATGGT
TTTCGTTTCG AGCCACAGCG TAAAAACATC TATTGGTTAG TGTGTGACAT GGTTGAAAAA
CCCGCGCGCG TGGCTGAGCT GATTGAAGCT TGGGCCATCA ATGGCTGGTT TAAAGAAGCG
ATTTTCAACC TCAAACTGCC GATGAAGAGC CGTTATAAAG AAGTGATGGC GATTTTGAAT
ACCATGCAGG AAATTCTCAA GGAAAACGGC ATCAACGAAT TCCAGTTGCA GTGTAAGCAT
TTATACCATG ACCGTGATGA AGTGACGGTT CACCTGTGGA TTAGACCGAG CCAGGCTTGG
AACTAA
 
Protein sequence
MKNLFLFCRA GYEKECAAEI QQRAAELNVG GFVKANNNDA YVVYQCFEED GGDILVKQLP 
LDSLIFARQM FAASELLADL PESDRVSPIV AALSDVSKAG ELRVETPDTN EAKELSAFCR
KFTVPLRQHL KKSGSLLAQE NPKRPIIHVC FIGPGRAYVG YSFSNNSSPY FMGIPRLKMA
ADAPSRSSLK LDEAFAQFVP KEEQEERVRS GMNAVDLGAC PGGWTYQLVR RGMMVSAVDN
GPMNEKLMET GQVKHFREDG FRFEPQRKNI YWLVCDMVEK PARVAELIEA WAINGWFKEA
IFNLKLPMKS RYKEVMAILN TMQEILKENG INEFQLQCKH LYHDRDEVTV HLWIRPSQAW
N