Gene Shewmr7_2770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2770 
Symbol 
ID4258070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3279751 
End bp3280290 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content46% 
IMG OID638123448 
ProductYfaZ family protein 
Protein accessionYP_738812 
Protein GI114048262 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000254967 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.114256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGT TCAGAGTAGC AAGTGTCTTA TTATTGAGTG CAGCCGCGCT GCAGGTGAAT 
GCGTCAGAAT TTAATCTTGG GTTAAACAAC GATGTGGTTT CTACCGAGTT AGAGCTGCAG
GTGAATAAAG ATGTCAATGC AGTATTAGGA TATATTTATT CAGACGATAG CGGTCATATT
GCCCAAGGCG CAATGCACAT GACCCATGAT GCGGGTGTGC ATCATTTTGA AGTTGGCGCT
AAGTTAAGCC AGTTATGGGC AGATGATGCG CCAAATGGTA GCACTGTGTC AGTCGGTGGT
CGTTATGCCT TGGCGTTAGG GCCAAACATC TCTTTGCATG CCGCGGCTTA CTATGCGCCA
TCGGTATTGT CTTTCGGTAA TGTCGATGGT CAATACGAAT TGGATTCAAA GGTACAGTAC
CGTGTGAACC CTAATATGGC GTTTTATGTC GGTTACCGTA AGATTGCCTT CGAATATGAT
CACGCCCGTG ATTTCACCTT CGAAGATGGC GTTTACATCG GCGGTAAGTT CCGCTTCTAA
 
Protein sequence
MAKFRVASVL LLSAAALQVN ASEFNLGLNN DVVSTELELQ VNKDVNAVLG YIYSDDSGHI 
AQGAMHMTHD AGVHHFEVGA KLSQLWADDA PNGSTVSVGG RYALALGPNI SLHAAAYYAP
SVLSFGNVDG QYELDSKVQY RVNPNMAFYV GYRKIAFEYD HARDFTFEDG VYIGGKFRF