Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2757 |
Symbol | |
ID | 4258493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3265207 |
End bp | 3265833 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638123435 |
Product | fumarylacetoacetate (FAA) hydrolase |
Protein accession | YP_738799 |
Protein GI | 114048249 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.530786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACTG TTAACGTCGG TGATAAACAG ATTTGCCCGA GTAAAATTCT TTGTATTGGG CGTAATTATG TCGACCATAT CCACGAGCTG GGTAATGATA TTCCCGAAGA TATGGTGGTG TTTTTCAAGC CCAACTCGGC GATTAGCACT GTGCTGCATG CTGAGCATTT AGGCGAGGCG CTGCACTATG AAACTGAGCT GTGTTTTATC TATCAGCAGG GGCGCTTTAG CCATGTTGGG GTCGGGTTGG ATCTGACTAA GCGAGAGCTG CAAAGCAAAC TGAAAGCCAA GGGGTTACCC TGGGAAAAGG CCAAGGCCTT CGATGACGCG GCGCTATTTA GTCCCTTTGT TGCTATCGAT GATGCCAGCG CGGCATTTGA ATTCAGTTTA ACGATTGACG GGGCGTTAAC CCAAGCAGGC CATATTGAGT TAATGATCTA TAACCCGCGG ACGATTCTAG ATGAATTACA ACGCTTTACC ACCTTAGAAG ACGGCGACAT TGTGATGACT GGCACCCCAA AAGGCGTCGG CATCATTCCA CCGAATCGGG TATTTAAGGT GGCCTTAGGC CTTAAGGATG CGCCACACCA AGCGCCCTTG GTCGAATGTG AATGGCAAAG CCAGTAA
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Protein sequence | MKTVNVGDKQ ICPSKILCIG RNYVDHIHEL GNDIPEDMVV FFKPNSAIST VLHAEHLGEA LHYETELCFI YQQGRFSHVG VGLDLTKREL QSKLKAKGLP WEKAKAFDDA ALFSPFVAID DASAAFEFSL TIDGALTQAG HIELMIYNPR TILDELQRFT TLEDGDIVMT GTPKGVGIIP PNRVFKVALG LKDAPHQAPL VECEWQSQ
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