Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2729 |
Symbol | |
ID | 4258448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3223686 |
End bp | 3224426 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638123407 |
Product | SpoOM family protein |
Protein accession | YP_738771 |
Protein GI | 114048221 |
COG category | [R] General function prediction only |
COG ID | [COG4326] Sporulation control protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.863876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAAAA AATTGCTGGC CTCTGTCGGT ATCGGTGGTG CGACGGTCGA TACCCAATTA ATTGATAATC GACTGCTGCC AGGTCAAATC TTTAATGCCA CTATCGTCGT TAAAGGCGGT AATGTGCCGC AGCAGATCTC CGGCCTCGAC TTAGCCCTAA TGACTAAGGT GAAAGTGAGT AGCGATAACG GCGACTATTT TAAGAACCAT CGTTTGGCGA GCTGGCGCTT AACTGAGTCC TTTGAAATTC AAGCGGGTGA AATTCGTGAG ATCCCGTTTT CAGGTAAATT ACACCCCGAA ACCCCTTTTA CTCAGCTCCC TGTGCGCAAT AATCAATCCC AGGTATGGTT ACAAACGGGA GTGGACATAG ATACCGCGCT CGACCCTAGC GATATCGATG CGCTGGTCAT TATGCCAACG GCGATTGCCG AGCATGTGTT AAAGGCGATG GATGCCCTTG GTTTTGTGTT GGTGAAAGCC GATGTGGAGC AAGGTTTCCT CAATACGCGC GCCTTTCGTT CCACTTCGGG TTGTTACCAA GAGCTAGAGT TTAAGCCGCG CAATATGGGC TTTAATCGTT TGCGTGAGAT AGAGGTTTCT CTGGTGTGCG ATGCCGAGCA AACCCATGTG TTGCTTGAGC TTGACCGCGC ATTCCGTGGC GATGGTTACT TATATTTCAG CCTGCCAAAC AATGCCACCT TGAGCCAAGT GCAAGAGATT TTTAGGGCGA ATTTGGCTTA A
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Protein sequence | MFKKLLASVG IGGATVDTQL IDNRLLPGQI FNATIVVKGG NVPQQISGLD LALMTKVKVS SDNGDYFKNH RLASWRLTES FEIQAGEIRE IPFSGKLHPE TPFTQLPVRN NQSQVWLQTG VDIDTALDPS DIDALVIMPT AIAEHVLKAM DALGFVLVKA DVEQGFLNTR AFRSTSGCYQ ELEFKPRNMG FNRLREIEVS LVCDAEQTHV LLELDRAFRG DGYLYFSLPN NATLSQVQEI FRANLA
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