Gene Shewmr7_2707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2707 
Symboltsf 
ID4255489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3201957 
End bp3202808 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content45% 
IMG OID638123385 
Productelongation factor Ts 
Protein accessionYP_738749 
Protein GI114048199 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.89418e-06 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0108139 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTT CTGCTGCCCA AGTTAAAGAA CTGCGCGAGC GTACTGGCGC AGGCATGATG 
GATTGTAAAA AAGCGTTAGA AGAAACCAAC GGCGACATGG AGTTAGCAAT TGACAACATG
CGTAAGTCTG GTGCTGCTAA AGCTGCTAAG AAAGCAGGTA ACATCGCTGC TGACGGTACT
ATCCTGATCA AAAACGGTGA AGGTTTCGCA GTACTGTTAG AAGTAAACTG CCAAACTGAC
TTCGTTGCTA AAGATGCGAA CTTCTTAGGT TTTGCTAACG CTGTTTTAGA CGTTGCTGCA
GCGTCTAAAG TGTCTTTAGA AGACTTAAAA GCCCAATTCG AAGAAGCCCG TGTTGCTCTG
GTTGCTAAAA TCGGTGAAAA CATCAACGTT CGTCGCGTTG AGTACATCGA CGGCACTCAA
TTAGCTTCTT ACCGTCACGG TGAGCGTATT GGTGTTGTAG TAACTGGTGA AGCGGATGAG
GAAACTCTGA AGCACTTAGC AATGCACGTT GCTGCTTCTA AGCCAGAATA CGTTAACCCA
GAAGACGTTC CAGCAGACGT AGTTGCTCGT GAACAAGCTC TGCAAATCGA AATCTCTATG
AATGAAGGCA AGCCTGCTGA AATCGCAGAG AAAATGGTTG TTGGTCGTAT GAAGAAGTTC
ACCGGTGAGA TCTCTCTGAC TGGTCAAGCT TACATCATGG AACCAAAGAA AACTGTTGGC
GAATTCTTGA AAGAGAAAGG CGCTAAAGTC ACTAACTTCA TTCGTTTAGA AGTGGGTGAA
GGTATTGAGA AGAAAGAAGA AGATTTCGCA GCTGAAGTTG CTGCTCAAAT CGCTGCTTCT
AAAAAGGCTT AA
 
Protein sequence
MAISAAQVKE LRERTGAGMM DCKKALEETN GDMELAIDNM RKSGAAKAAK KAGNIAADGT 
ILIKNGEGFA VLLEVNCQTD FVAKDANFLG FANAVLDVAA ASKVSLEDLK AQFEEARVAL
VAKIGENINV RRVEYIDGTQ LASYRHGERI GVVVTGEADE ETLKHLAMHV AASKPEYVNP
EDVPADVVAR EQALQIEISM NEGKPAEIAE KMVVGRMKKF TGEISLTGQA YIMEPKKTVG
EFLKEKGAKV TNFIRLEVGE GIEKKEEDFA AEVAAQIAAS KKA