Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2706 |
Symbol | pyrH |
ID | 4255488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3201159 |
End bp | 3201887 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638123384 |
Product | uridylate kinase |
Protein accession | YP_738748 |
Protein GI | 114048198 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0528] Uridylate kinase |
TIGRFAM ID | [TIGR02075] uridylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000157467 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00256739 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCACCA ATCCAAAACC TGCATTTAGA CGCATTCTTC TAAAATTAAG TGGCGAAGCA CTGATGGGCG ACGAAGGCTT CGGCATCGAT CCTAAAGTGT TAGATCGCAT GGCTCAAGAA GTGAAAGAGC TGGTAGAGTT AGGCATTCAG GTGGGTGTGG TCATTGGTGG TGGTAATCTA TTTCGCGGTG AAGGCCTAGC AAAAGCTGGC ATGAACCGTG TGGTGGGCGA TCACATGGGT ATGCTGGCAA CGGTTATGAA CGGCTTGGCC ATGCGTGATG CCCTGCACCG TGCCTATGTT AATGCTCGTC TGATGTCGGC AATCCCGTTA AAAGGGGTAT GTGACGACTA CAATTGGGCT GAGGCTATCA GCTTATTAAA ATCAGGCCGT GTAGTGATTT TTGCTGCGGG TACTGGTAAC CCATTCTGCA CTACCGATTC TGCGGCTTGC TTACGCGGCA TTGAAATCGA AGCAGAAGTC GTGCTAAAAG GCACTAAAGT TGACGGCGTT TATTCTGACG ACCCGATGAA AAATCCAGAA GCAGTGAAGT ACGATGAATT ATCGTACACT GAAGTACTGG ACAAAGAATT AAAAGTAATG GACTTAGCAG CCTTTACGAT GGCGCGTGAT CATGACATGC CAATCCTAGT ATTCAACATG AACAAACCAG GTGCACTGCG CCGCGTGGTC ATGGGTGAAG AAGAAGGCAC AATGATCAGA GCGAAATAA
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Protein sequence | MSTNPKPAFR RILLKLSGEA LMGDEGFGID PKVLDRMAQE VKELVELGIQ VGVVIGGGNL FRGEGLAKAG MNRVVGDHMG MLATVMNGLA MRDALHRAYV NARLMSAIPL KGVCDDYNWA EAISLLKSGR VVIFAAGTGN PFCTTDSAAC LRGIEIEAEV VLKGTKVDGV YSDDPMKNPE AVKYDELSYT EVLDKELKVM DLAAFTMARD HDMPILVFNM NKPGALRRVV MGEEEGTMIR AK
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