Gene Shewmr7_2701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2701 
Symbol 
ID4255483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3196167 
End bp3197537 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content49% 
IMG OID638123379 
Productpeptidase RseP 
Protein accessionYP_738743 
Protein GI114048193 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0750] Predicted membrane-associated Zn-dependent proteases 1 
TIGRFAM ID[TIGR00054] RIP metalloprotease RseP 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000971838 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00353487 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTAGATT TTTTGTGGAA CTTAGGTTCG TTTATCGTCG CGCTTGGGCT GCTTATCACC 
GCCCACGAAT ACGGCCATTT CTATGTTGCA CGCCGCTGTG GCGTGAAAGT TGAACGTTTC
TCGATTGGTT TTGGTAAGGC GATTTGGCGC AGAGTCGGCC AGGATGGCAC TGAGTATGTG
GTCGCCATGA TCCCGTTAGG CGGCTATGTC AAAATGCTCG ATGAGCGAGT AGAAGACGTA
CCCGATGAGT TAAAGGATCA AGCCTTTAAC CGTAAAAGTG TATGGCAACG GATTGCGATT
GTGGCCGCAG GTCCGATTGC AAACTTTATC TTTGCAATTA TCGCACTGTA TTTAATGTAT
TTAATTGGCG TGCCATCGCT CAAGCCAGTG ATTACCTCAA CCACACCTGG CACAGCGGCG
GCGCAAATCC AAGTGACTGA GCCGATGCAA GTGACGGCGA TTTCAGGTCA ACCAGTACGT
AATTGGGAAG AAGTGAATTT AGCGCTAGTT GGCCATATCG GCGATGACAG TTTAACCGTC
TCACTTGCGC CGTTAAATGG CTTGCAGGGC TTAGACACCT CGGCCCGTAC TTATACCCTT
GATACCCGCG AGTGGCGCTT CGACCCAGAA AAAGAGTCGC CGATTACTGC GCTTGGGTTA
GGCGTGTATC GCCCCGCAAT TGAGCCACAA ATTGCGCTCA TCAGTGAAGG CAGTGCTGCG
GCTAAGAGTG AGCTTAAAAT CGGTGATACT TTGGTTGCTA TCAATGGCGA AAATTACACC
GATTGGCAAG CTTTTGTTGA CATTATTCAA CATTCTGCCA ATGTGCCAGT GGAGTTAACT
GTGCGCAGAG CTGGCGAGCA GTTTGCCATC TCAGTCACAC CCTCTAGTGT TAAAAATAGC
GATGGCAAAG AAGTGGGCGT GCTTGGGGTG AGCCCGACTC AGGCGCAATG GCCTGAGAAT
ATGCGCCTAC AACTCGAATA TGGTCCAATC GATTCTTTCG CTATCGCGGT TGATAAAACA
TGGCAACTTG TGGCCGTGAG CTTTAAGATG ATTGGCAAAT TATTTACTGG CGATGTGTCA
GTGAAAAACT TAAGTGGACC TATCTCAATC GCACAGGGTG CGGGCAATAG TGCAAACTAT
GGCTTGGTTT ACTTTCTCGG TTTCCTCGCG CTTATCAGTG TCAATTTAGG CATCATTAAC
CTGCTGCCAT TGCCTGTGCT CGATGGAGGA CACCTGCTGT ATTACTTCGT TGAGGTAATC
ACTGGTAAAC CTGTGTCTGA AAAGGTACAG GAAATAGGAT TCAGATTTGG GGCAGCATTG
CTGCTGATGT TGATGAGCAT CGCGCTCTTC AATGACTTTG CCCGACTCTG A
 
Protein sequence
MLDFLWNLGS FIVALGLLIT AHEYGHFYVA RRCGVKVERF SIGFGKAIWR RVGQDGTEYV 
VAMIPLGGYV KMLDERVEDV PDELKDQAFN RKSVWQRIAI VAAGPIANFI FAIIALYLMY
LIGVPSLKPV ITSTTPGTAA AQIQVTEPMQ VTAISGQPVR NWEEVNLALV GHIGDDSLTV
SLAPLNGLQG LDTSARTYTL DTREWRFDPE KESPITALGL GVYRPAIEPQ IALISEGSAA
AKSELKIGDT LVAINGENYT DWQAFVDIIQ HSANVPVELT VRRAGEQFAI SVTPSSVKNS
DGKEVGVLGV SPTQAQWPEN MRLQLEYGPI DSFAIAVDKT WQLVAVSFKM IGKLFTGDVS
VKNLSGPISI AQGAGNSANY GLVYFLGFLA LISVNLGIIN LLPLPVLDGG HLLYYFVEVI
TGKPVSEKVQ EIGFRFGAAL LLMLMSIALF NDFARL