Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2701 |
Symbol | |
ID | 4255483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3196167 |
End bp | 3197537 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638123379 |
Product | peptidase RseP |
Protein accession | YP_738743 |
Protein GI | 114048193 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000971838 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00353487 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTAGATT TTTTGTGGAA CTTAGGTTCG TTTATCGTCG CGCTTGGGCT GCTTATCACC GCCCACGAAT ACGGCCATTT CTATGTTGCA CGCCGCTGTG GCGTGAAAGT TGAACGTTTC TCGATTGGTT TTGGTAAGGC GATTTGGCGC AGAGTCGGCC AGGATGGCAC TGAGTATGTG GTCGCCATGA TCCCGTTAGG CGGCTATGTC AAAATGCTCG ATGAGCGAGT AGAAGACGTA CCCGATGAGT TAAAGGATCA AGCCTTTAAC CGTAAAAGTG TATGGCAACG GATTGCGATT GTGGCCGCAG GTCCGATTGC AAACTTTATC TTTGCAATTA TCGCACTGTA TTTAATGTAT TTAATTGGCG TGCCATCGCT CAAGCCAGTG ATTACCTCAA CCACACCTGG CACAGCGGCG GCGCAAATCC AAGTGACTGA GCCGATGCAA GTGACGGCGA TTTCAGGTCA ACCAGTACGT AATTGGGAAG AAGTGAATTT AGCGCTAGTT GGCCATATCG GCGATGACAG TTTAACCGTC TCACTTGCGC CGTTAAATGG CTTGCAGGGC TTAGACACCT CGGCCCGTAC TTATACCCTT GATACCCGCG AGTGGCGCTT CGACCCAGAA AAAGAGTCGC CGATTACTGC GCTTGGGTTA GGCGTGTATC GCCCCGCAAT TGAGCCACAA ATTGCGCTCA TCAGTGAAGG CAGTGCTGCG GCTAAGAGTG AGCTTAAAAT CGGTGATACT TTGGTTGCTA TCAATGGCGA AAATTACACC GATTGGCAAG CTTTTGTTGA CATTATTCAA CATTCTGCCA ATGTGCCAGT GGAGTTAACT GTGCGCAGAG CTGGCGAGCA GTTTGCCATC TCAGTCACAC CCTCTAGTGT TAAAAATAGC GATGGCAAAG AAGTGGGCGT GCTTGGGGTG AGCCCGACTC AGGCGCAATG GCCTGAGAAT ATGCGCCTAC AACTCGAATA TGGTCCAATC GATTCTTTCG CTATCGCGGT TGATAAAACA TGGCAACTTG TGGCCGTGAG CTTTAAGATG ATTGGCAAAT TATTTACTGG CGATGTGTCA GTGAAAAACT TAAGTGGACC TATCTCAATC GCACAGGGTG CGGGCAATAG TGCAAACTAT GGCTTGGTTT ACTTTCTCGG TTTCCTCGCG CTTATCAGTG TCAATTTAGG CATCATTAAC CTGCTGCCAT TGCCTGTGCT CGATGGAGGA CACCTGCTGT ATTACTTCGT TGAGGTAATC ACTGGTAAAC CTGTGTCTGA AAAGGTACAG GAAATAGGAT TCAGATTTGG GGCAGCATTG CTGCTGATGT TGATGAGCAT CGCGCTCTTC AATGACTTTG CCCGACTCTG A
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Protein sequence | MLDFLWNLGS FIVALGLLIT AHEYGHFYVA RRCGVKVERF SIGFGKAIWR RVGQDGTEYV VAMIPLGGYV KMLDERVEDV PDELKDQAFN RKSVWQRIAI VAAGPIANFI FAIIALYLMY LIGVPSLKPV ITSTTPGTAA AQIQVTEPMQ VTAISGQPVR NWEEVNLALV GHIGDDSLTV SLAPLNGLQG LDTSARTYTL DTREWRFDPE KESPITALGL GVYRPAIEPQ IALISEGSAA AKSELKIGDT LVAINGENYT DWQAFVDIIQ HSANVPVELT VRRAGEQFAI SVTPSSVKNS DGKEVGVLGV SPTQAQWPEN MRLQLEYGPI DSFAIAVDKT WQLVAVSFKM IGKLFTGDVS VKNLSGPISI AQGAGNSANY GLVYFLGFLA LISVNLGIIN LLPLPVLDGG HLLYYFVEVI TGKPVSEKVQ EIGFRFGAAL LLMLMSIALF NDFARL
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