Gene Shewmr7_2678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2678 
Symbol 
ID4255583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3164439 
End bp3164885 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content48% 
IMG OID638123356 
Producthypothetical protein 
Protein accessionYP_738720 
Protein GI114048170 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1664] Integral membrane protein CcmA involved in cell shape determination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.185603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000395785 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTGGCA AAAAATTTAC CTTTACCCGA AGCGCTTCCC CAGCACTGAG TTTTATCGCC 
GAAGGGACTA AGCTTACGGG CAATATCGAA TTTGCCGGCG ATGTATTGAT AGGCGGTGAT
GTGCAAGGTC AGATCCTGTC ACAGGCCAAT GTCATCGTTG AGCGCACAGG TAACCTCAAC
TGCGAGGTTA AATGCCGCGA GTTGATTATC GATGGCTATT TTAAGGGTCG TTTGATTTGC
GAGCGCTTAG TCATCCAAGC CCATGGTATT GTCGATGGCG ATGTGGCTTG CACCTCGATG
CAAATCAGTG AAGGTGGTCA GTTTATCGGT TTAAGGATTA AAGAAGACCA TCAGACAATC
CATGCCCATA GCCTGCCATC AGCGACTTCG AAAAGTGCAT TAATGACACC TGTGACCAGC
TTGTCACCCG AGAGTGCTAA CGAGTAG
 
Protein sequence
MFGKKFTFTR SASPALSFIA EGTKLTGNIE FAGDVLIGGD VQGQILSQAN VIVERTGNLN 
CEVKCRELII DGYFKGRLIC ERLVIQAHGI VDGDVACTSM QISEGGQFIG LRIKEDHQTI
HAHSLPSATS KSALMTPVTS LSPESANE