Gene Shewmr7_2670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2670 
Symbol 
ID4255575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3156432 
End bp3157082 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content53% 
IMG OID638123348 
Productmaleylacetoacetate isomerase 
Protein accessionYP_738712 
Protein GI114048162 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID[TIGR01262] maleylacetoacetate isomerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0314293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0122257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAT ACGGTTATTG GCGCTCTAGC GCCGCCTATC GTGTGCGTAT TGCCCTCAAT 
CTTAAAGGCG TGAGCGCCGA GCAGCTGTCG GTGCATTTAG TGCGTGATGG TGGCGAGCAG
CACAAGGCGG ATTATATCGC CCTAAACCCA CAGGAGCTGG TGCCGACCTT AGTGGTCGAT
GATAAGCAGG ATGGTGATGC CTTATCCCAA TCCCTCGCCA TTATCGAGTA TCTGGATGAG
CTTTATCCAA AGACGCCGCT ACTGCCTGCA TCGGCGCTTG AACGTGCCCA TGTGCGTGCC
ATGGGGTTAA CCATCGCCTG TGAAATTCAT CCACTCAATA ACCTGCGGGT ATTGCAGTAT
TTAACTCAGA AGCTGAACGT CGCCGAAGAA GCTAAAACCG CTTGGTATCA CCATTGGGTG
GCGAGTGGCT TCGCGGCGCT CGAAACCCAA CTTGCGCGCC ATAGTGGCCG TTATTGTTTT
GGTGATAAAG TGACGCTGGC GGATCTGTGC TTAGTACCGC AGGTTTACAA CGCCCAGCGT
TTTAATGTGG ATTTAACGCC GTACCCCAAT ATCATGCGGG TATGGGCTGA ATGTAATCTG
TTGCCAGCCT TTGCGGATGC GGCGCCAGAG CGTCAAGCCG ACGCAGTTTA A
 
Protein sequence
MKLYGYWRSS AAYRVRIALN LKGVSAEQLS VHLVRDGGEQ HKADYIALNP QELVPTLVVD 
DKQDGDALSQ SLAIIEYLDE LYPKTPLLPA SALERAHVRA MGLTIACEIH PLNNLRVLQY
LTQKLNVAEE AKTAWYHHWV ASGFAALETQ LARHSGRYCF GDKVTLADLC LVPQVYNAQR
FNVDLTPYPN IMRVWAECNL LPAFADAAPE RQADAV