| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2578 |
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| Symbol | |
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| ID | 4256660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3047412 |
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| End bp | 3049364 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638123256 |
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| Product | decaheme cytochrome c |
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| Protein accession | YP_738620 |
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| Protein GI | 114048070 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00427395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00803379 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATGAACG CACAAAAATC AAAAATCGCA CTGCTGCTCG CAGCAAGTGC TGTCACTGTG
GCCTTAACCG GCTGTGGTGG AAGTGATGGT AACGATGGTA AACCCGGTGA ACCCGGTGGC
GAGCCAGCTC CAGCCATTCA AAAACTCAAT TTTACATTCA ACAAATCAGT AGTGACTAAC
GGTGTCCCAA GTGTGGAATT CACCGTCACT AACGAAGACG ATTTACCCGT TGTTGGTCTG
CAGAAAATGC GCTTTGCTGC AGCTCAGCTG ATTCCACAGG GTGCAACAGG TGCTGGTAAT
GCCTCTCAGT GGCAATACTT CGGTGATGAG ACCTGTGATG TGGCATCTAC CTGTCCCGGT
ACCTTCGTGG ACATGAAGAA CGGCCACTAC AGCTACACCT TCAAGATGAA CCTCAGCGCC
AACGCTAAGA TCACCTACAA CGATCAGTTA GCGCAACGTG TTCTGATCCG CGCTTACAAC
ACGCCATTAC CAGATGGCAC ACAAGTCCCT AATAGCAACG CTTATGTTGA TTTTACCGCT
GACACAGGTG CAACACCGGG TTACAGCCGT AAAGTCGTCG CCACAGAAAG CTGTAATGCT
TGTCACCAAG ACTTAGCCAA TGTGAAACAC GGCGGCGCTT ACTCAGATGT GAACTACTGC
GCGACTTGCC ATACTTCTGG CAAAGTGGGT GTAGGTAAAG AATTTAACGT GTTAGTCCAC
GCTAAACATA AAGACCTCAC CTTAGGTTCG TTAGAAAGCT GCCAAAGCTG TCACGTTGAA
ACCGAAGCCG CGCCTGATTG GGGCAACTGG TCACGTATTC CAACCGCCGC AACCTGCAGC
AGCTGCCATA CTGCCGTTGA TTTTGCCGCA GGCAAAGGCC ACTCTCAGCA GTTAGATAAC
TCTAACTGTA TCGCTTGTCA CAACAGCAAT TGGACCGCCG AGTTACACAC AGGCAAAACC
GCTGAGAAGA AAGCTGTCAT GGCTCAGTTA GGTGTGTCTG CAACGCTTGC GGGTCAAGAA
GACAATACTG CGGTATTAAC CGTATCTATC TTAGATAAAG ACGGTAATGC CATCGATGCA
GCAAGCGTAC AAGATAAGAT CAAACGTTTA GAAACGATCA CTAACGTCGG TCCTAACTTC
CCGATCATGG GCTATAACCC AAGCCCAGTA ACTGGCTACA AGAAAGTGGC TAAAGATCTG
GTGAAAGATG GTGCACTGCA AGATGGTGTG ACCTTAGTTG ACGGTAAACT GGTATTTACT
ACTCCTGCAC TGCCATTTGG TGCTGGCGAT ACTGATACCG CCTTTACCTT TATCGGTCTG
GAAATGTGTA ACACTGGCAC CACGCTGACG GCTTGTACTG CAGATAGCAC AACCACCAGC
ATGAAAGCCG ACTTAGTCTT CGGTACTAAA TCAGGCAATG CACCCAGCAT GCGCCATGTG
AACTCAGTAA ACTTCAGCAC CTGTCAAAAC TGTCACAGTG ATACCTTCGA GCTACACAAA
GGTCACCACT CAGGCTTTGT GATGACAGAA CAAGTTTCAC ATGCCAAAGA CGCCAACGGT
AAGCCAATTG TCGGTGTGGA TGCCTGTGTG GCCTGTCATA CCCCTGATGG TACCTATGCA
AGCGGTGCAA ACAAAGGTGG TTTCGAAATG AAACTGCACG TAGTTCACGG TGAGCAAGGC
GTTATCAAAG AATGTACTCA GTGCCACAAC GACTTCAACT TAGACGCGTT CAAAGTGAAG
GGTGCACTGG CCACTTCTGC CGGTAAATAC ACCACCCCAA TCACAGCAAC TTGTACTTCA
TGCCACGCGC CAGAATCTAT TGGCCACGGC TTAGAAAATA TGGGCGCGAT TGTGAACGGT
GATTATGTTC AAGCCAACCA AGCGGCACAG TCAGAAACCT GTTTCTACTG CCATACCCCA
ACAGTTGCAG ATCACACTCA AGTGAAAATG TAA
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| Protein sequence | MMNAQKSKIA LLLAASAVTV ALTGCGGSDG NDGKPGEPGG EPAPAIQKLN FTFNKSVVTN
GVPSVEFTVT NEDDLPVVGL QKMRFAAAQL IPQGATGAGN ASQWQYFGDE TCDVASTCPG
TFVDMKNGHY SYTFKMNLSA NAKITYNDQL AQRVLIRAYN TPLPDGTQVP NSNAYVDFTA
DTGATPGYSR KVVATESCNA CHQDLANVKH GGAYSDVNYC ATCHTSGKVG VGKEFNVLVH
AKHKDLTLGS LESCQSCHVE TEAAPDWGNW SRIPTAATCS SCHTAVDFAA GKGHSQQLDN
SNCIACHNSN WTAELHTGKT AEKKAVMAQL GVSATLAGQE DNTAVLTVSI LDKDGNAIDA
ASVQDKIKRL ETITNVGPNF PIMGYNPSPV TGYKKVAKDL VKDGALQDGV TLVDGKLVFT
TPALPFGAGD TDTAFTFIGL EMCNTGTTLT ACTADSTTTS MKADLVFGTK SGNAPSMRHV
NSVNFSTCQN CHSDTFELHK GHHSGFVMTE QVSHAKDANG KPIVGVDACV ACHTPDGTYA
SGANKGGFEM KLHVVHGEQG VIKECTQCHN DFNLDAFKVK GALATSAGKY TTPITATCTS
CHAPESIGHG LENMGAIVNG DYVQANQAAQ SETCFYCHTP TVADHTQVKM
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