| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2576 |
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| Symbol | |
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| ID | 4256658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3042719 |
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| End bp | 3044638 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638123254 |
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| Product | decaheme cytochrome c MtrF |
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| Protein accession | YP_738618 |
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| Protein GI | 114048068 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.134423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00876105 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAACAAGT TTGCAAGATT TAGCACACAA TTCAGTCTGT TGCTGGCCTT AACCACCCTA
CTTACTGCCT GTGGTGGCAG TGACGGTAAC GATGGCGATC CTGGCGAGCC TGGTAAACCA
CCCGCGATGA CAATCACCAA GCTAAAGATC ATGGTCGATA AAGTCGCCGT GACCGACGGC
ATTGCCCAAG TCGATTATCA GGTGAGTAAC CAAGATGATG AAGCCGTAGT CGGTATTCCC
TCGGCCACCT TCATTGCGGC GCAATTACTG CCTCAGGGCG CGACAGGTGC GGGCAATAGC
AGTGAGTGGC AACACTTTAC CTCTGAAACG TGTGCCGCTT CTTGCCCAGG CACGTTTGTC
GACCATAAAA ACGGCCATTA CAGCTATCGT TTTAGTGCCA CATTTAACGG CATGAATGGT
GTGAGCTTCC TTAACGATGC AACCCAACGA ATAGTCATCA AATTGGGCGG AGATGCACTA
GCCGATGGCA CGGCGCTCCC CATTACCAAT CAACACTACG ATTGGCAAAC CTCGGGTAAT
ACCCTAGCCT ACAGCCGTAA CTTAATCACT ATTGAAACCT GTAATAGCTG TCACAGTAAT
TTGGCGTTCC ATGGTGGCCG TTACAACCAA GTTGAAACCT GCGTAACTTG TCATAACAGT
AAAAGAGTCA GTGATCCTGC GGATATTTTC CCGCAAATGA TCCACAGCAA ACACTTAACG
GGATTCCCTC AATCCATCAG TAATTGCCAG ACTTGCCACG TTGATAATCC TGATTTAGCC
GAAGCTCAAA ACTGGCATAG AGTCCCCACC ATGGAAGCCT GTGGTGCCTG CCATACCCAA
ATTAACTTCC CTGCGGGCCA AGGCCATCCT GCGCAAGCAG ATAACAGCAA TTGCGTTGCC
TGCCATAATG CCGATTGGAC CGCCAGCGTA CACGGTAATG AAGGTCAAAC AGCCGCGTTA
GCCCAGTTTA GTCCTAGCAT CAGTAGCGCA AGTATGGATG CCAATGGCAC AGTGACCGTT
GCCGTGACGC TGAGCAATCC ATCCACCGGT ACTGTATACA GTGATAGCGC AGATAAGCTC
AAATTTATCA GCGATCTAAG GGTCTATGCT AACTGGGGAA CCAGTTTCGA TTACAGTACC
CGCTCCGCGC GCTCAATTCG TCTACCCGAG TCCACACCGG TCTCTGGCAG CAACGGCACT
TACACTTATA CCATTTCGGG TCTCACGGTT CCGGCAGGAA CTGAAGCGGA CCATGGCGGC
TTAGCGATTC AAGGTCGAGT TTGCGCCAAA GATAAGGTAT TAGTGGATTG CAGCACTGAA
CTTGCCGAAG TACTGGTTAT CAAGGCAAGC CATAGTTACT TTGATATGTC AGCCTTAAGT
GCCACTGGCA GACGCGAAGT CATTAGCAAT GCCAACTGTG CTAGCTGCCA CGGCGATCAA
CAACTGAATA TTCATGGCGC CCGTAATGAT TTAGCGGGCC AATGCCAGCT TTGCCACAAC
CCGAATATGC AGGCCGATGC CACAGCGGTA AATCCCTCCA TTACCTCCTT TGACTTTAAG
CAGTTAATCC ATGGGATCCA TACCAGCCAA TTTGCCGGTT TTGAAGACCT CAACTACCCA
GGCAAAATCG GTAATTGTGC TCAATGCCAT ATCAAAGATG CTGCAGGAGT TTCAACGGTT
GCCCTCCCCT TAAACGCGGC GGTTCAACCA CTTGCACTGA ACAACGGTAC CTTTACCAGC
CCAATAGCTG CGGTGTGCAG TAACTGTCAC TCAAGTGATG CCACACACAA CCATATGATG
CAGCAAGGTG CAGTATTTGC GGGAACAAAA GCCGATGCCA CCGCGGGCAC TGAAACCTGT
GCTTTCTGCC ACGGACAAGG CGCTGTCGCC GACGTTTTAA AAGTGCACCC TATTAAATAA
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| Protein sequence | MNKFARFSTQ FSLLLALTTL LTACGGSDGN DGDPGEPGKP PAMTITKLKI MVDKVAVTDG
IAQVDYQVSN QDDEAVVGIP SATFIAAQLL PQGATGAGNS SEWQHFTSET CAASCPGTFV
DHKNGHYSYR FSATFNGMNG VSFLNDATQR IVIKLGGDAL ADGTALPITN QHYDWQTSGN
TLAYSRNLIT IETCNSCHSN LAFHGGRYNQ VETCVTCHNS KRVSDPADIF PQMIHSKHLT
GFPQSISNCQ TCHVDNPDLA EAQNWHRVPT MEACGACHTQ INFPAGQGHP AQADNSNCVA
CHNADWTASV HGNEGQTAAL AQFSPSISSA SMDANGTVTV AVTLSNPSTG TVYSDSADKL
KFISDLRVYA NWGTSFDYST RSARSIRLPE STPVSGSNGT YTYTISGLTV PAGTEADHGG
LAIQGRVCAK DKVLVDCSTE LAEVLVIKAS HSYFDMSALS ATGRREVISN ANCASCHGDQ
QLNIHGARND LAGQCQLCHN PNMQADATAV NPSITSFDFK QLIHGIHTSQ FAGFEDLNYP
GKIGNCAQCH IKDAAGVSTV ALPLNAAVQP LALNNGTFTS PIAAVCSNCH SSDATHNHMM
QQGAVFAGTK ADATAGTETC AFCHGQGAVA DVLKVHPIK
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