Gene Shewmr7_2567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2567 
Symbol 
ID4257520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3031590 
End bp3032081 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content46% 
IMG OID638123245 
Productpeptidyl-prolyl cis-trans isomerase, cyclophilin type 
Protein accessionYP_738609 
Protein GI114048059 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000398691 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0620683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACAT TACACACTAA TTTTGGCGAC ATTAAACTGC AACTGAACGC CGAAAAAGCA 
CCGCTGACCG TGGCAAACTT TATGAAATAT GTTGACGAAG GTTTCTTCGA CGGCACCATT
TTCCACCGTG TAATTGACGG CTTTATGATC CAAGGTGGTG GCTTCACCAC TGAAATGAGC
CAAAAACGTT GCCATGAGCC AGTGAAAAAC GAAGCCAACA ACGGTTTATC AAACCGTACT
GGTACTATCG CGATGGCGCG TACTTCTGAT CCGCACTCAG CGACGGCTCA GTTCTTCATC
AACGTAAACG ATAACACCTT CCTCGATTTC AAATCTGAAA GCATGCAAGG CTGGGGTTAC
TGCGTATTTG GTGAAGTGGT TGAAGGCATG GACATCGTTG AAAAAATCAA AGCTGTCAGC
ACTGGTAACC GTGGCATGCA CCAAGATGTG CCATTAGAAG CGGTTGTGAT TGAAAAAGTA
AGTGCGGCCT AA
 
Protein sequence
MITLHTNFGD IKLQLNAEKA PLTVANFMKY VDEGFFDGTI FHRVIDGFMI QGGGFTTEMS 
QKRCHEPVKN EANNGLSNRT GTIAMARTSD PHSATAQFFI NVNDNTFLDF KSESMQGWGY
CVFGEVVEGM DIVEKIKAVS TGNRGMHQDV PLEAVVIEKV SAA