| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2566 |
|---|
| Symbol | cysS |
|---|
| ID | 4257519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 3030070 |
|---|
| End bp | 3031455 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638123244 |
|---|
| Product | cysteinyl-tRNA synthetase |
|---|
| Protein accession | YP_738608 |
|---|
| Protein GI | 114048058 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000164638 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0688617 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATGT TGAAGATTTA CAACAGTATT ACCCGCCAAA AACAGGAATT TAAGCCAATT
ACTCCCGGAA AAGTTGGGAT GTATGTATGC GGAGTGACCG TATACGATCT GTGTCATATT
GGCCATGGGC GTACTTTTGT TTCCTTCGAT ATGATCGTTC GCTACCTGCG TTACGCGGGT
TATGAAGTGA ATTTTCAACG TAACATTACC GATATTGATG ACAAAATCAT CAAACGCGCC
AACGAAAACC AAGAAGATTG CAATACATTA ACCGATCGCT TGATTGGTGA AATGCACAAG
GATTTCGATG CGCTGAATAT GATCCGTCCC GATTTCGAGC CTCGTGCTAC TCTGCACATT
GCCGAAATCA TCGATATGGT TGAGCGCTTA CTGGCCCGTG GTCATGCCTA TGTGGCAGCC
GATGGCGATG TGCTGTTCAG TGTGGCCTCA TTTCCTGAGT ACGGCCGGCT ATCAGGTCAG
AACCTGGAGC AATTACAGGC GGGGGCACGG GTTGAGGTTG ACGATAACAA GCAAAATCCA
ATGGATTTCG TGCTATGGAA AATGTCTAAA CCGGGCGAGC CAACATGGGA ATCGCCATGG
GGACCGGGTC GTCCAGGCTG GCATATCGAA TGTTCGGCAA TGAACAGCAA GCACTTAGGT
TTGCATTTTG ATATTCACGG TGGCGGTTCA GATTTACAAT TCCCTCACCA TGAGAACGAA
ATTGCTCAGT CTTGCTGCGC CCATGATACG CCGTACGTGA ATTACTGGAT GCACACTGGC
ATGGTGATGG TTGACCGCGA GAAGATGTCC AAGTCTTTAG GTAACTTCTT CACTATTCGT
GATGTATTAG GCCATTACGA TCCTGAAACC GTGCGTTACT TCCTGCTATC GGGTCACTAC
CGTAGCCAAA TCAACTATTC AGAAGAAAAC CTCAAGCAGG CGCGTGCCGC CTTAGAGCGT
TTATACACTG CGATTAAAGA TGTTGACCTG ACTGTAGCGC CGGCACCTGC CGAAGAGTTT
GTCGCTAAGT TTAAAGCGGC AATGGACGAT GACTTTAATA CGCCAGAAGC CTACTCAGTG
CTGTTTGATA TGGTACGTGA GATCAACCGT TTGAAAACCA CCGATATGGC GCAGGCTTCA
GCTATGGCTG TTGCCATGAA GCAACTGGCC GATGTATTGG GATTATTGCA CCAAGCGCCC
GATGCCTTCT TTAAAGGCGA GGGTAGCGAT GATGAAGTGG CAGAGATTGA AGCGCTGATC
GTTGAGCGTA ATCGTGCCCG GGCCGAGAAA GATTGGCCGG CGGCCGATGT TGCGCGTAAT
CGTTTAAATG AGCTTGGTGT GGTCTTAGAA GATGGCCCAA GCGGTACCAC TTGGCGTAAG
AAATAG
|
|---|
| Protein sequence | MPMLKIYNSI TRQKQEFKPI TPGKVGMYVC GVTVYDLCHI GHGRTFVSFD MIVRYLRYAG
YEVNFQRNIT DIDDKIIKRA NENQEDCNTL TDRLIGEMHK DFDALNMIRP DFEPRATLHI
AEIIDMVERL LARGHAYVAA DGDVLFSVAS FPEYGRLSGQ NLEQLQAGAR VEVDDNKQNP
MDFVLWKMSK PGEPTWESPW GPGRPGWHIE CSAMNSKHLG LHFDIHGGGS DLQFPHHENE
IAQSCCAHDT PYVNYWMHTG MVMVDREKMS KSLGNFFTIR DVLGHYDPET VRYFLLSGHY
RSQINYSEEN LKQARAALER LYTAIKDVDL TVAPAPAEEF VAKFKAAMDD DFNTPEAYSV
LFDMVREINR LKTTDMAQAS AMAVAMKQLA DVLGLLHQAP DAFFKGEGSD DEVAEIEALI
VERNRARAEK DWPAADVARN RLNELGVVLE DGPSGTTWRK K
|
|---|
| |