Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2564 |
Symbol | tig |
ID | 4257517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3026718 |
End bp | 3028022 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638123239 |
Product | trigger factor |
Protein accession | YP_738606 |
Protein GI | 114048056 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000061517 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0625081 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGTTT CTGTTGAAGC AACCCAAGGC CTAGAGCGTC GCCTGACCAT TTCTGTTCCT GCTGAACAAA TTGAAAAACT GGTTAAAGAC AGTTTACAAC GTGAAGCTAA GCGTGCTCGT ATCCCAGGTT TCCGTCCTGG CAAAGTGCCT GTTACTGTAA TCAACAAGCG TTATGGCGCC GCTATTCGTC AAGACATCAC TGGTGAAGTG ATGCAACGTA ATTTTATCGA AGCGATCATC GCTGAGAAAT TAAACCCAGC TGGCGCACCA ACTTTCGTAC CTGGTGCGAC TGACGGTGAA AAATTCGAAT TCGTAGCGAC TTTCGAAATC TACCCAGAAG TTGAGCTGAA AGGTTTAGAT GCAATCGAAG TAGAACAACC AAAAGCGTCT GTAACCGATG CTGACGTAGA CAGCATGATC GAAACCTTAC GTAAGCAACA CGCGACTTTC GCAGCTGTTG AGCGTGAAGC GGCTGACGGC GACAAAGTGA AAATGAACTT TGTTGGTTCA GTTGACGGTG TTGAATTCGA AGGCGGTAAA GCTGACGATT TCGAACTGCA ATTAGGCAGC GGCCGTATGA TCCCAGGTTT TGAAGCGGGT ATCTTAGGTC ACAAAGCCGG TGAAGAATTC GTTATCGACG TGACTTTCCC AGAAGAATAT CACGCTGAAA ACTTAAAAGG TAAAGCGGCT AAGTTTGCTA TCACTTTAAC TGAAGTGTTA GCGGCTAACT TACCAGAAGT AAACGATGAG TTTGCTGCAT TATTTGGTAT CAGCGAAGGC GGCTTAGAAG CGCTGAAAAC TGAAATCCGT AAGAACATGA ACCGTGAACT TGAGCAAGCG TTAAAAGCTA ACGTGAAAGA GCAAGTGATC AACGGTCTGT TAGCTAACAA CGACATCGAA CTGCCAAAAG CACTGATCGA TGGCGAAGTT AACGTACTGC GTCAACAAGC GATGCAACGT TTCGGCGGTC AAACGGCTAA CATGCCAGAA CTGCCAGCGG AATTATTCAC TGAGCAAGCG GCTCGTCGCG TGAAAATCGG TCTGTTATTA GGCGAAGTCA TCAAGACTAA CGAGCTAAAA GCTGAAGATG AGCGTGTACA AGCGTTAATC GCTTCTATGG CTTCTGCTTA CGAAGATCCA AGTGAAGTTG TTGCGTACTA CAACAGCAAC AAAGAGCTGA TGCAAAACAT GCGCAACGTT GCGCTTGAAG AGCAAGCTGT TGAAGCACTG CTGAAATCTG CCAAAGTGAC CGAAAAAGAA GTCGCTTTTG AAGAATTTAT GAACAAGGCT ACAGGTCGCG CATAA
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Protein sequence | MQVSVEATQG LERRLTISVP AEQIEKLVKD SLQREAKRAR IPGFRPGKVP VTVINKRYGA AIRQDITGEV MQRNFIEAII AEKLNPAGAP TFVPGATDGE KFEFVATFEI YPEVELKGLD AIEVEQPKAS VTDADVDSMI ETLRKQHATF AAVEREAADG DKVKMNFVGS VDGVEFEGGK ADDFELQLGS GRMIPGFEAG ILGHKAGEEF VIDVTFPEEY HAENLKGKAA KFAITLTEVL AANLPEVNDE FAALFGISEG GLEALKTEIR KNMNRELEQA LKANVKEQVI NGLLANNDIE LPKALIDGEV NVLRQQAMQR FGGQTANMPE LPAELFTEQA ARRVKIGLLL GEVIKTNELK AEDERVQALI ASMASAYEDP SEVVAYYNSN KELMQNMRNV ALEEQAVEAL LKSAKVTEKE VAFEEFMNKA TGRA
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