Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2511 |
Symbol | |
ID | 4257587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2966311 |
End bp | 2968428 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638123186 |
Product | anaerobic ribonucleoside triphosphate reductase |
Protein accession | YP_738553 |
Protein GI | 114048003 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00222 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCAGTCG TGATCAAGCG GGATGGTTGC CGCACACCTT TTGATGAAAC AAGGATAAGA GATGCAGTGA TAGCGGCTGC AAACTCGGTT GGGATAGAGG ATGCTGACTA TGCCGCGACG GTTGCCGCTT GTGTGAGGGA GCGAGTGGCC AATCTGGCAG AAGTCGAGAT CCACCATTTA CAGGATGCGG TTGAAAACCT ACTGATGGAA GGGCCTTACA AGTCTCTGGC GCGGGTCTAT ATCGAGTATC GCCATGACAG AGATATTTGC CGCGATGCGA CCAGTAAACT CAATCTTGAA ATCCGTGGTT TAGTGGAGCA GAGCAATGCG GCGCTGTTAA ATGAAAACGC CAATAAAGAC TCTAAAGTGA TCCCAACCCA GCGCGATCTA CTCGCGGGTA TCGTCGCTAA ACATTACGCC AAGAGCCATA TTCTGCCTAA GGATGTGGTG GCCGCCCATG AACTTGGTGA AATCCATTAC CACGATCTCG ATTATTCGCC GTTTTTCCCG ATGTTTAACT GCATGTTGAT TGATTTGGCG GGCATGTTGA CCCACGGTTT TAAGATGGGC AACGCCGAAA TTGAGACCCC AAAGTCCATC TCCACCGCTA CGGCGGTAAC GGCGCAGATC ATTGCCCAAG TGGCCAGTCA TATTTATGGC GGCACCACGA TTAATCGTAT TGATGAAGTG CTCGCGCCTT TTGTGGCGAA GAGCTATGAC AAACACTATC AAGTGGCACT TAACTGGCAA ATTAAAGACG CCAAGGCCTA TGCGACGGCG CTCACCGAAA AAGAATGTCA TGACGCTTTC CAATCCCTTG AATATGAAGT GAATACCTTA CATACCGCCA ATGGACAAAC GCCCTTTGTG ACTTTTGGTT TTGGTCTGGG GACTTCGTGG GAGTCGCGTT TAATTCAGCA ATCCATGTTG AAAGTTCGTA TGACGGGCCT AGGTAAAAAT CGTAAGACTG CCGTGTTCCC TAAACTGGTG TTTGCGATTC GTGATGGCAT TAACCACAAG GCTGGTGATT GCAACTACGA TGTCAAACAA ATGGCTCTTA AATGCGCCAG CATGCGCATG TATCCGGATA TTTTGAACTA CGAGCAAGTG GAAAAGGTCA CGGGTTCATT TAAAACCCCT ATGGGCTGTC GCAGCTTTTT AGGCTCCTAT AAAGAAAATG GCGAATTGGT CCATGAAGGG CGCAATAACC TTGGTGTTGT GAGCTTAAAC TTGCCCCGAG TTGCCCTCGA GGCTAATGGC GATGAGGCGG AATTTTATCG CATTTTAGAT GAGCGTTTAC TGCTTGCCCG CCGCGCATTA GACACCCGCA TCGAACGATT AAACGGCGTT AAAGCCAGAG TTGCACCGAT TTTGTATATG GAAGGCGCAT GTGGTGTGCG CCTGCGCGCC GATGATGATG TCGCCCAAAT TTTTAAAAAT GGTCGGGCGT CGATTTCATT AGGCTATATC GGTTTGCATG AAACCATCAA TGCGCTCTAT GGCACACAAA CCCATGTGTT TGATGATGCC AAGCTTCGTG AAAAAGCGGT GGCGATTGTC GCACACCTTA AAGCCGCCAC CGATGCATGG AAGGCTGAAA CCGGTTATGG GTTTAGCCTT TATAGCACCC CGAGTGAGAG TCTCTGCAGC CGTTTCTGTA AACTCGATGC GCGCCAATTC GGCGTAGTTG CGGGGGTCAC CGATAAGGGC TACTACACCA ATAGTTTCCA CTTGGATGTG GAAAAGCGGG TGAATCCTTA CGATAAGATT GACTTTGAAC AGCCATATCC TGCGATCGCC AATGGTGGAT TTATTTGCTA CGGCGAATAT CCCAATATGC AGCACAACAT CGAAGCGCTG GAAAATGTGT GGGATTACAG TTATAGCCGT GTGCCTTACT ACGGTACTAA CACGCCGATT GATGAATGCT ACGACTGCGG TTTTACCGGC GAGTTTAGCT GTACCAGTAA AGGTTTTACT TGCCCTAAAT GCGGTAACCA TGAGCCAAGC CGAGTGTCCG TTACCCGCCG AGTGTGCGGT TACTTAGGTA GCCCCGACGC CAGACCATTC AACCATGGCA AGCAAGAAGA AGTGAAGCGC AGGATCAAAC ACCTGTAA
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Protein sequence | MPVVIKRDGC RTPFDETRIR DAVIAAANSV GIEDADYAAT VAACVRERVA NLAEVEIHHL QDAVENLLME GPYKSLARVY IEYRHDRDIC RDATSKLNLE IRGLVEQSNA ALLNENANKD SKVIPTQRDL LAGIVAKHYA KSHILPKDVV AAHELGEIHY HDLDYSPFFP MFNCMLIDLA GMLTHGFKMG NAEIETPKSI STATAVTAQI IAQVASHIYG GTTINRIDEV LAPFVAKSYD KHYQVALNWQ IKDAKAYATA LTEKECHDAF QSLEYEVNTL HTANGQTPFV TFGFGLGTSW ESRLIQQSML KVRMTGLGKN RKTAVFPKLV FAIRDGINHK AGDCNYDVKQ MALKCASMRM YPDILNYEQV EKVTGSFKTP MGCRSFLGSY KENGELVHEG RNNLGVVSLN LPRVALEANG DEAEFYRILD ERLLLARRAL DTRIERLNGV KARVAPILYM EGACGVRLRA DDDVAQIFKN GRASISLGYI GLHETINALY GTQTHVFDDA KLREKAVAIV AHLKAATDAW KAETGYGFSL YSTPSESLCS RFCKLDARQF GVVAGVTDKG YYTNSFHLDV EKRVNPYDKI DFEQPYPAIA NGGFICYGEY PNMQHNIEAL ENVWDYSYSR VPYYGTNTPI DECYDCGFTG EFSCTSKGFT CPKCGNHEPS RVSVTRRVCG YLGSPDARPF NHGKQEEVKR RIKHL
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