Gene Shewmr7_2484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2484 
Symbol 
ID4256373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2939915 
End bp2940619 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content46% 
IMG OID638123159 
Producthypothetical protein 
Protein accessionYP_738526 
Protein GI114047976 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00768413 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.204356 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATAAGA GTTTAGTGAC AAATGTGTTG GCTGCCATTT GTGTGGTATT GGGATACGCA 
TTGAGTCTGC CTATTTTGTT TAATGTCGGT TTGTTTGCCT TATCTGGCGC GATAACTAAC
TGGCTTGCTG TGTATATGCT GTTTGAAAAG GTGCCCGGTT TATATGGTTC GGGCGTAGTG
CCATCGCGTT TTGAAGAGTT CAAAGCCGGC ATTGCACATC TTATGATGAA GCAGTTCTTC
ACGACGGAAA ATATCGACCG TTTTCTGTCG GAAAAAGAAG GAATTAGCCA AATCGATTTA
GCCCCTGTGA TTGATAAAGT GGACTTGGCG CCATCCTTCG ATGCCTTAAT TAACACAGTG
GCACAATCTT CCTTCGGGGG CATGTTATCC ATGTTTGGCG GAACTGAGGC GTTAATGCCG
TTAAAGGAAC CCTTTATCGA AAAGATGAAA GCCTCTTTGG TGGAAATGTC CCAGAGTGAG
CAGTTCCGTA ATTTATTGAA ACAAGAAATA GAGCAGCCAG ATGTGATGGC CGATCTGCAA
ACGAAGATCG CCAATATCGT TGAACAACGC CTGAATGAAT TAACGCCGCA AATGGTTAAA
CAAATCGTGC AGGAGATGAT CCAGACACAT TTAGGTTGGC TGGTCGTGTG GGGCGGGGTA
TTTGGTGGCG CTATCGGACT TGTCGCCGCT CTGGTACAGG GTTAA
 
Protein sequence
MNKSLVTNVL AAICVVLGYA LSLPILFNVG LFALSGAITN WLAVYMLFEK VPGLYGSGVV 
PSRFEEFKAG IAHLMMKQFF TTENIDRFLS EKEGISQIDL APVIDKVDLA PSFDALINTV
AQSSFGGMLS MFGGTEALMP LKEPFIEKMK ASLVEMSQSE QFRNLLKQEI EQPDVMADLQ
TKIANIVEQR LNELTPQMVK QIVQEMIQTH LGWLVVWGGV FGGAIGLVAA LVQG