| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2476 |
|---|
| Symbol | |
|---|
| ID | 4256365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 2932301 |
|---|
| End bp | 2933878 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638123151 |
|---|
| Product | sulphate transporter |
|---|
| Protein accession | YP_738518 |
|---|
| Protein GI | 114047968 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0599682 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAACA GAGGTTTCAT GTTCGATCTC TTTCGCCACA AAACATCTAG TCACAAAGCC
GATATTCTCT CGGGTCTGAC GGTCGCACTT GCACTTATTC CAGAAGCGGT AGCCTTTGCC
TTTGTCGCCA ACGTCGAACC TATGGTCGGC CTCTATGCTG CCTTTATAAT GGGATTAGTT
ACCGCATTAA TTGGCGGACG CCCAGGCATG ATTTCTGGCG CGACGGGAGC GATGGCCGTA
GTGATGGTGT CATTGGTAGT TGAACATGGC GTGCAATACT TATTTGCCGC TGTGGTGCTG
GCAGGATTAA TCCAAATCAG CGCTGGGGTC TTTAAACTGG GGAAGTTTAT CCGCATCGTC
CCCTACCCTG TGATGATAGG CTTTGTGAAT GGCCTAGCCA TAGTGATTTT CTTGGCTCAG
CTCGGGCAAT TTAAAGTCAA AAATGCCGCA GGGGAATTAG TCTGGCTACC GCTAGAGCCT
TTGATGCTAA TGCTAGGGCT CGTCGCACTG ACTATGGCGA TTATTTACTT TCTCCCCAAA
CTGACTACAG CTGTGCCCTC ATCGTTAGTT GCGATTCTAA GCGTGACCGC CATCGTAGTA
GGTTTTGACT TAGACACCCG AAATGTGTTG GATTTTCTTA AAACCATGAG TGGCGATGAA
CATGCGACCA TCGCAGGTTC ACTCCCAAGC TTTGCGATCC CACAAGTGCC TTTTAACCTT
GAGACACTCT ATATCATTCT ACCCTATGCC TTTATTTTAG CCGCAGTCGG GTTAATCGAA
TCCCTATTAA CATTAACGGT TATCGATGAG ATGACGAATA CCCGAGGACG AAGCAATAAA
GAATGTATTG GTCAAGGCGT AGGTAACATC ACTAGCGGCT TTTTTGGTGC CATGGGCGGC
TGTGCCATGA TTGGTCAATC TATGATCAAC ATTAACTCAG GTGGACGCGG CAGATTATCT
GGTATTACCG CAGCTATCGG TTTACTGACC TTTATCCTGT TTGGTGCATC TTTTATCGAA
ATCATTCCGC TTGCCGCTTT GGTTGGCGTG ATGTTTATCG TGGTGCTCGG CACATTCGAG
TGGGCGAGTT TTAAGTTTAT GGGCAAAGTG CCTAAACATG ATGCCTTTGT GATTGTGCTC
GTCACCACAG TGACTGTCTT TACCGATCTC GCCTTTGCCG TCTTTGTGGG GGTAGTCGTA
TCCGCACTGG TATTTGCTTG GCAACACGCT AAACACATCA GTGTCAAAGT GACTTCAAAT
AGTTTAGGTT GGAAAGTCTA TGAGCTTAAT GGTCCATTGT TCTTTGGCTC AGTGGCCAGT
TTCCTTGAAT TATTCGATGC ATCACAGGAT CCGCAGGATG TAGTGATCGA TTTTAAGCAT
TCTCGAGTAG CCGATCACTC GGCGCTAGAC GCCATAGATA CGCTTGCCGA ACGCTATGTG
GCAATGGGGA AAAAGCTGCA TTTAGTGCAT TTAAGTGCCG ATTGTAAGGC CTTACTTCAC
AAAGCAGGCG ATTTGGTTGA GGTCAATCTG CTTGACGATC CCCACTATAA AGTTGCGGAC
GATAAGCTCG ACTCCTAG
|
|---|
| Protein sequence | MINRGFMFDL FRHKTSSHKA DILSGLTVAL ALIPEAVAFA FVANVEPMVG LYAAFIMGLV
TALIGGRPGM ISGATGAMAV VMVSLVVEHG VQYLFAAVVL AGLIQISAGV FKLGKFIRIV
PYPVMIGFVN GLAIVIFLAQ LGQFKVKNAA GELVWLPLEP LMLMLGLVAL TMAIIYFLPK
LTTAVPSSLV AILSVTAIVV GFDLDTRNVL DFLKTMSGDE HATIAGSLPS FAIPQVPFNL
ETLYIILPYA FILAAVGLIE SLLTLTVIDE MTNTRGRSNK ECIGQGVGNI TSGFFGAMGG
CAMIGQSMIN INSGGRGRLS GITAAIGLLT FILFGASFIE IIPLAALVGV MFIVVLGTFE
WASFKFMGKV PKHDAFVIVL VTTVTVFTDL AFAVFVGVVV SALVFAWQHA KHISVKVTSN
SLGWKVYELN GPLFFGSVAS FLELFDASQD PQDVVIDFKH SRVADHSALD AIDTLAERYV
AMGKKLHLVH LSADCKALLH KAGDLVEVNL LDDPHYKVAD DKLDS
|
|---|
| |