| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2475 |
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| Symbol | |
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| ID | 4256364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2928887 |
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| End bp | 2932174 |
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| Gene Length | 3288 bp |
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| Protein Length | 1095 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638123150 |
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| Product | RNAse E |
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| Protein accession | YP_738517 |
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| Protein GI | 114047967 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.350754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0309861 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTA TGTTAATCAA TGCAACTCAA TCAGAAGAGT TGCGTGTTGC CCTGGTTGAC
GGGCAACAAC TGTACGATCT GGATATTGAA AGTCCTGGTC ACGAGCAAAA AAAATCCAAC
ATTTACAAGG GTAAAATCAC CCGCGTAGAA CCCTCTTTAG AAGCCGCTTT CGTTGACTAT
GGTGCAGAGC GCCACGGCTT CTTACCGCTA AAAGAAATCG CCAGAGAGTA CTTCCCTAAA
GGTTATTCTT TCCAAGGTCG CCCAAACATC AAAGAAGTGG TCAGTGAAGG ACAAGAAGTT
ATTGTTCAAA TTGACAAAGA AGAGCGCGGT AACAAAGGTG CTGCACTGAC AACCTTTATC
AGCCTTGCAG GTTCTTACTT AGTCTTGATG CCAAACAACC CTCGTGCAGG CGGTATTTCT
CGCCGTATCG AAGGTGATGA GCGCACCGAA TTAAAAGAAG CCATGGCCGA TTTAGAAGTA
CCTGCGGGTA TGGGACTTAT CGTGCGTACC GCGGGTGTTG GCAAAGAATC AGCCGAATTG
AAGTGGGACT TGAAAGTCCT GCAACACCAC TGGGCCGCCA TTACCGAAGC CGCACAAAGC
CGCAATGCAC CTTTCTTAAT TCATCAAGAA AGTAACGTTA TTGTGCGTGC AATTCGTGAT
TATCTGCGCC GTGATGTGGG CGAGATTTTA ATCGATCACC CACGTATTTA CGAAGAAGCC
AAGCAACATA TCGCACTGGT ACGCCCTGAT TTCGTTGAGC GTGTAAAACT CTACGAAGCC
GAAGTGCCAT TATTTACTCA CTTCCAAATC GAGTCGCAAA TTGAATCCGC GTTCCAACGT
GAAGTGCGTC TGCCATCGGG CGGCTCGATT GTTATCGACC CAACGGAAGC ATTAACCTCA
ATCGATATCA ACTCTGCCCG CGCAACGAAG GGCGGTGATA TTGAAGAAAC CGCACTAAAT
ACCAACCTTG AAGCCGCCGA TGAGATTGCC CGTCAATTAC GTCTGCGTGA CTTAGGTGGT
CTGGTCGTGA TCGACTTTAT CGATATGACG CCAGTGCGCC ATCAACGTGA AGTTGAAAAC
CGCCTACGTG ATGCCGTGCA CCATGACCGT GCCCGCGTAC AATTAGGCCG CATTTCTCGC
TTTGGTCTGA TGGAAATGTC ACGCCAACGT CTGCGTCCAT CGTTAGAAGA ATCGGCTGCG
CATATCTGCC CTCGCTGTCA TGGCCAAGGC ACGATTCGTA GTACCGAATC TTTAGCACTG
TCGATTCTGC GTTTGATGGA AGAAGAAGCC ATCAAGGAAA ACACCTCACA AATCGAAGCT
ATCGTGCCTG TCGATGTGGC GGCCTTCCTG CTGAACGAAA AACGCAAAGC GATTCGTATC
ACCGAACAAC GCCATGATGT AGAAGTCTAT GTGATCCCAG ATCCACATAT GATGACTCCT
GATTATCGCG TTATTCGTCA CCGCACTGAC GATGAAATCG ATGAATCTAG TTACAAGCGC
ATCGAACAGC CAGAAGCCAA GTTATACGAA CCCCGTAAAC TGGAACGCAC TGCTGCGCCA
GCACCAGCAC TAAAAGGCTT CACTGCACCA CAGAAAGTCG AACAAGCCGC TGCACCTGTT
GCCAACAAAG TGGAAGCCAC CGAGCCAGGT TTCTTCAGCA AACTGTTCAG TGCCATTGGC
GCTTTCTTCA GCTCAAGCGA TAAGCCTGCA GCTGAAAAGA CCACTGAAAC CAAAAAGTCT
GACAGCCAAA CGGCCAATGC GAACCGTCGT AACCGTCGTA ATGACACTCG CCGCACTCGC
AATAACCAAG ATGCTGACAA AGCGAAAGAA GGCACCCGCG AACCACGCAC TCGCAATGCC
AAGAAAGCGG CCGATGCACC TCAGGCTCAG GAGCGTCCCG CTCGTGAAAA AGACGAGAAT
GCAAAACGCA CTAAGCCAGA GCCTAAGAGC CGTAATCAAG CACCGAAAGA AGTGGTAGCA
GAGTCTCAAG ACGACACGCC AAAGCAAGAA GTGGCCCGTG AGCGTCGTCA GCGTCGTAAT
ATGCGCCGTA AAGTACGCAT CGATAACGCC AATGAAACCA CCGAAGCGCC AATTCAAGAA
GAAGTGGTTT TAGCCGAAGT GGCCGCAGTC AATGCAGCCA ATACTGAGGT TGCAGTAGAG
ACACAAGCGG AAACGAAAGC ACCGCGCTCA CGTCGCCAGC CACGCAAAGA AACCGCGGTT
GCCAATGAGA CAGCAGAAGC GACTGATGCA GTGAGCCAAG TGGAAGCAAG CACTGAAGTT
ACCGCTGACA AGCCAGTGGT TGAAAACCGT GCTGATGCCC CTGCTGACGT AACCGAAGTG
AAGACCGAAG CCGAGACCGA TGCGGATAAC GCAGAACTCA GTGCCGATGC AGATGATAAA
GCGAAACGCG AATCTCGCGA TGGACAGCGT CGTAGCCGCC GCAGCCCACG TCATTTGAGA
GCCGCGGGTC AACGTCGTCG CCGTGATGAA GATGAGCAAG GCGCCTCTGC ACCTGCGCAA
TTCGTACCAA ACGATGCGCT AGGTGAAGCT CAAGACTACC CAGCGCCAAC CGCTCAAACT
GCAGAAGCAG CTGAGACCAC AGAAGCAAAA GCAATTGAAG TCGCCGCAGA ACCGACAGTG
ACATCTCCTG CAGCTGTAGT CGAAACGGCA GATGTCATTG TAGTTGCTGA AACAACCGCC
AATAACGCTG TTGAGACTGA AGTTATTGAG ACAGTAGCTA CAGAGCAAGT GGCTGAGATT
AAAGCTGAAG TTGCAGTAAC AGAAGCTCCT GCTCACACTG CGGTAAACAA CAAGCCAGAG
ACGAGCGTTA AGGCTAAAGA AGTTGCTGTT GAGCCAGCTA AAACTGTAGA AGCGGTTACA
GAAGCCATTG TGATCCATGC CGAAACTCCA GTTGCTCAAG CGAAAGCAGA AACTGTTGCA
GTTGAAGCGG TAGCGCCCGA AGTGGAAAAA GCCGAAGTGA AAGAAGCCGT GAAATCAGTG
GCCTCAGCTC CAATGGCAAA ACCTGCGCCA ATCGTTAAAC CACAGGCGAA ACCAGTTGTC
ACTCAAGCTG TCGCAGCCCC TGCAGCTGAA ACCGTGGTGA GCAAACCCAA AGCCGCTAGC
CGTTTTGGTT CAATGGTGTC ATCAGAGATG ACCAAGCCGA CGGTAGAAGT CAGAACACAG
GTAGAAGTGC CAAAAGGCCG CGAGTATGAC AATACCGCCT CAGCCGAAGT CACTGCGCCT
AAGCTGAAGC AAAGCAATAG CGCCGAATCG GATATGGCTC GTCCATAA
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| Protein sequence | MKRMLINATQ SEELRVALVD GQQLYDLDIE SPGHEQKKSN IYKGKITRVE PSLEAAFVDY
GAERHGFLPL KEIAREYFPK GYSFQGRPNI KEVVSEGQEV IVQIDKEERG NKGAALTTFI
SLAGSYLVLM PNNPRAGGIS RRIEGDERTE LKEAMADLEV PAGMGLIVRT AGVGKESAEL
KWDLKVLQHH WAAITEAAQS RNAPFLIHQE SNVIVRAIRD YLRRDVGEIL IDHPRIYEEA
KQHIALVRPD FVERVKLYEA EVPLFTHFQI ESQIESAFQR EVRLPSGGSI VIDPTEALTS
IDINSARATK GGDIEETALN TNLEAADEIA RQLRLRDLGG LVVIDFIDMT PVRHQREVEN
RLRDAVHHDR ARVQLGRISR FGLMEMSRQR LRPSLEESAA HICPRCHGQG TIRSTESLAL
SILRLMEEEA IKENTSQIEA IVPVDVAAFL LNEKRKAIRI TEQRHDVEVY VIPDPHMMTP
DYRVIRHRTD DEIDESSYKR IEQPEAKLYE PRKLERTAAP APALKGFTAP QKVEQAAAPV
ANKVEATEPG FFSKLFSAIG AFFSSSDKPA AEKTTETKKS DSQTANANRR NRRNDTRRTR
NNQDADKAKE GTREPRTRNA KKAADAPQAQ ERPAREKDEN AKRTKPEPKS RNQAPKEVVA
ESQDDTPKQE VARERRQRRN MRRKVRIDNA NETTEAPIQE EVVLAEVAAV NAANTEVAVE
TQAETKAPRS RRQPRKETAV ANETAEATDA VSQVEASTEV TADKPVVENR ADAPADVTEV
KTEAETDADN AELSADADDK AKRESRDGQR RSRRSPRHLR AAGQRRRRDE DEQGASAPAQ
FVPNDALGEA QDYPAPTAQT AEAAETTEAK AIEVAAEPTV TSPAAVVETA DVIVVAETTA
NNAVETEVIE TVATEQVAEI KAEVAVTEAP AHTAVNNKPE TSVKAKEVAV EPAKTVEAVT
EAIVIHAETP VAQAKAETVA VEAVAPEVEK AEVKEAVKSV ASAPMAKPAP IVKPQAKPVV
TQAVAAPAAE TVVSKPKAAS RFGSMVSSEM TKPTVEVRTQ VEVPKGREYD NTASAEVTAP
KLKQSNSAES DMARP
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