| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2458 |
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| Symbol | |
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| ID | 4256169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2911391 |
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| End bp | 2913619 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638123133 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_738500 |
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| Protein GI | 114047950 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0314212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAATCTC GTTTTGCCTA TTCAATACTA ACGCTTGCCC TGATGCCGCA TTTGGTCTTG
GCGGCTGCGC CTAACGCTCA AGAGAGCAAA CCCGAGCAAG AAAATACTTC AGCGGCACAA
TCCGCTACCC AAGCAAGCAC TCAAGCCTTA GCGCAAACCA ATGTGCGGAC TGACACTAAA
GCGCCCGAGC GGATTGTGGT GCGTGGTCGC GCCATGCAAA TGTACGTCGA TAAAGAGACG
GAAATCGGTA CAAAAAAGGC GGTTAATGTG ATGGAGCTGC CGCAGTCGGT ACAAGTGCTG
ACCGAGCAAC TGATTGACGA CCAAGCCGCC CGCAATATTA CCGACTTATA CCGCTCCATT
GCTGGAGTGA GTGAATTTAG CTATTCCGGT GTGACTTTTC GTGGCTTTCG CGATGATGCC
AACGTGTTTT ACGACGGCGT GCGTGGCGAT CCGTATTCGG GTTTTTCGGT GCCACAACTG
TTCAACGTGC AGCGGGTTGA AGTGCTAAAA GGCCCCGCAT CGGCACTCTA TGGCGGCGGT
GAACCCGGCG GCATGATCAA CTATGTCACT AAAAAGCCGA CATTTGTGGA GCGTAAAGAG
CTTACCCTAA GCACGGGCAG TTACGACATG ATGGGCGGCT CGCTGGATTT CACCGGAGGT
TTAACTGAGG ATTTAGCCTA TCGTTTAGGG GGCTATTATC AGCAGGAAAA TAGCTTTCGT
AACAATGCCG ATAGCATGAA TGCCGAAGTG GCGGGTGGCT TACTGTATGA AATCAGTGAA
GATACCAAGC TCACCACCAC ATTCGATCTG ATCAAACAGG ATTTGGGCGG TAATCGACTC
CGTGGTGTAC CCGTGGATGA TGCGGGGAAT TTCCTGGTTG ATCCTTCCTA CAATGCTAAC
GAGAAGAGCG ACTTCCAAAA GATGGATGCT TTGGTGCTGC AAGCGATTCT CGATCATCAA
TTTACGGATG ATTTTTCGGT GAAAACGCAG CTCCGTTATC TCACGAATGA CTCCGATCAG
CAGTACCACG AGTCCCGTGG TTGGGTCGAT GTCAACGGTG ACGGCAAAGC TAACAGCGCG
GATGGCACGA TCAAACGTGA ATATCGGGTG CAAGCCCGTG CTAATGATGA AATCAGTTTA
ACCAATGATT TTGTTTATCG TTTTAATGCC TTAGGTTTTG AGCATGAGTT CCTGTTCGGC
GGCGATTATC ACTATGTTGA AACCGAGTAC CATTACAAAC TGGCGACGGA TAAAACCGGC
GTCGGTAACC TGAATATTTA TGAGCTTAAC TACGGTGAGA CTGACCCTAA CACTTATCAG
TTAAAAGACA TGGATACTGA CGGTACCCGT GCCAACCGCT TTGGCCTGTA TCTGCAAGAG
CATCTGCATT TTAACGAACA GTGGTCATTG ATTGCAGGCC TGCGTTTTAG TCAGTTTGAA
GATTACAACA AGAAGACCGG ATTCTCCTTT AGCGATAATG CCATTACCCC AAGGGCGGGC
CTGAATTATC GTCCACTCGA GTCTATGTCC TTTTACTTGA ACTATTCAGA GAGCTTTAAT
CCCGCTTCAT TGAGCGATCA GGAGCAGGAA GGGGGCGATG GTTATCTTGA CCCTGAAACC
GGTAATCAAA TTGAGCTTGG GATGAAAAAC GAGTGGTTGG ATGGCCAGTT TATGACCACA
CTCGCGCTCT ATCGTATTGA AAAACAAAAC GTGGCTCAGG CGAACCCACT CGATACCGGC
AAGGATGATG GAATTCCTGA CTTAGTGAAT TTAGGCGAAG TGCGCAGTCA AGGCGTCGAA
TGGACGCTGG TGGGGGACTT AACCGATAAC CTGACCATGA CCGCCAACTA TGCCTATAAC
GATACCGAAG TGATCAAAGG TGTGACCAAC GACAGCCTGA CCAACACCTT CGGTGATGGT
AAACGTTTTG CCAATGCGCC GCGCCATCAA GCAGGGTTAT GGACGCGCTA TGATATTCAA
GCGATTGATT CGGCCATTGC CTTTGGGATG GACTATGTGG GCGAGCAATT TAGCCTCAAT
GGTCAAACGG TAAAACCCCA TACTGTGTTT GATATGAGCT GGACGACCCA GTGGGACCAA
ACCCAAGTGC GCGTAAATCT GAAGAATATT TTCGATAAGG AATATGCTGT CAGCGGATTT
AGTGAGCGCA ATGGCCATTT CCCTGGCGAG CCTCGCAATG TCACACTCGA GTTGAGCCAT
AAGTTCTAG
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| Protein sequence | MKSRFAYSIL TLALMPHLVL AAAPNAQESK PEQENTSAAQ SATQASTQAL AQTNVRTDTK
APERIVVRGR AMQMYVDKET EIGTKKAVNV MELPQSVQVL TEQLIDDQAA RNITDLYRSI
AGVSEFSYSG VTFRGFRDDA NVFYDGVRGD PYSGFSVPQL FNVQRVEVLK GPASALYGGG
EPGGMINYVT KKPTFVERKE LTLSTGSYDM MGGSLDFTGG LTEDLAYRLG GYYQQENSFR
NNADSMNAEV AGGLLYEISE DTKLTTTFDL IKQDLGGNRL RGVPVDDAGN FLVDPSYNAN
EKSDFQKMDA LVLQAILDHQ FTDDFSVKTQ LRYLTNDSDQ QYHESRGWVD VNGDGKANSA
DGTIKREYRV QARANDEISL TNDFVYRFNA LGFEHEFLFG GDYHYVETEY HYKLATDKTG
VGNLNIYELN YGETDPNTYQ LKDMDTDGTR ANRFGLYLQE HLHFNEQWSL IAGLRFSQFE
DYNKKTGFSF SDNAITPRAG LNYRPLESMS FYLNYSESFN PASLSDQEQE GGDGYLDPET
GNQIELGMKN EWLDGQFMTT LALYRIEKQN VAQANPLDTG KDDGIPDLVN LGEVRSQGVE
WTLVGDLTDN LTMTANYAYN DTEVIKGVTN DSLTNTFGDG KRFANAPRHQ AGLWTRYDIQ
AIDSAIAFGM DYVGEQFSLN GQTVKPHTVF DMSWTTQWDQ TQVRVNLKNI FDKEYAVSGF
SERNGHFPGE PRNVTLELSH KF
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