| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2452 |
|---|
| Symbol | |
|---|
| ID | 4255778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 2903404 |
|---|
| End bp | 2904441 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638123127 |
|---|
| Product | phosphoribosylaminoimidazole synthetase |
|---|
| Protein accession | YP_738494 |
|---|
| Protein GI | 114047944 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0150] Phosphoribosylaminoimidazole (AIR) synthetase |
|---|
| TIGRFAM ID | [TIGR00878] phosphoribosylaminoimidazole synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.038607 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.28403 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACTC CTACCCCACT GAGCTATAAA GACGCTGGCG TTGATATTGA TGCTGGTAAT
GCACTGGTAA GTAACATTAA AGCGGCTGTT AAACGTACCC GTCGTCCAGA GGTAATGGGC
AACTTAGGTG GTTTTGGCGC ATTGTGTGAA TTACCCACTA AATACAAGCA ACCTGTTTTA
GTGTCAGGCA CCGACGGTGT TGGTACTAAA TTGCGTTTAG CTATCGATTA CAAAAAACAC
GACACAGTCG GTATCGACTT AGTGGCCATG TGTGTGAACG ACTTGATCGT TCAAGGCGCT
GAGCCATTGT TTTTCCTCGA TTACTACGCA ACAGGCAAGC TCGATGTAGA AACAGCAACC
TCTGTTGTTA ACGGCATCGG CGAAGGTTGT TTCCAATCTG GTTGTGCGTT AATCGGCGGC
GAAACCGCTG AAATGCCAGG CATGTATGAA GGCGAAGATT ACGACCTCGC AGGTTTCTGT
GTGGGCGTGG TTGAAAAGGC CGACATCATT GACGGGAGTA AAGTGGCTGC GGGTGATGCG
CTGATCGCCT TAGCCTCAAG CGGTCCTCAT TCAAATGGCT ATTCATTAGT TCGTAAAGTA
TTAGAAGTCA GCCAAGCGGA CCCTCAACAG GACCTCAATG GCAAGCCATT GATCCAACAT
CTGTTAGAAC CAACCAAAAT TTACGTTAAA TCATTGCTCA AGCTGATCGA AGCATCGGAC
GTGCACGCAA TGGCGCACAT CACTGGCGGC GGTTTCTGGG AAAACATCCC CCGCGTACTG
CCTGAAAACT GCAAAGCCGT TATCCAAGGT GATTCATGGC AATGGCCTGC TGTTTTCAAT
TGGTTAATGG AAAACGGTAA CATTGCAGAA TATGAAATGT ACCGCACCTT TAACTGTGGT
GTCGGCATGA TCGTTGCGCT GCCAGCCGAT AAAGTTGATG CCGCACTGGC ACTGCTCGCC
GCCGAAGGCG AACAAGCTTG GCTAATCGGT GCTATCGCTC CTCGCGAAGG CAATGAAGAG
CAAGTGGAGA TCCTGTAA
|
|---|
| Protein sequence | MSTPTPLSYK DAGVDIDAGN ALVSNIKAAV KRTRRPEVMG NLGGFGALCE LPTKYKQPVL
VSGTDGVGTK LRLAIDYKKH DTVGIDLVAM CVNDLIVQGA EPLFFLDYYA TGKLDVETAT
SVVNGIGEGC FQSGCALIGG ETAEMPGMYE GEDYDLAGFC VGVVEKADII DGSKVAAGDA
LIALASSGPH SNGYSLVRKV LEVSQADPQQ DLNGKPLIQH LLEPTKIYVK SLLKLIEASD
VHAMAHITGG GFWENIPRVL PENCKAVIQG DSWQWPAVFN WLMENGNIAE YEMYRTFNCG
VGMIVALPAD KVDAALALLA AEGEQAWLIG AIAPREGNEE QVEIL
|
|---|
| |