Gene Shewmr7_2447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2447 
Symbol 
ID4255773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2898447 
End bp2899115 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content48% 
IMG OID638123122 
Productribonuclease T 
Protein accessionYP_738489 
Protein GI114047939 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR01298] ribonuclease T 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000116461 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.258904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA TTAGCGACGC AAACAAATTG AAACACCGAT TTCGAGGCTA CTTTCCGGTT 
GTCATAGATG TCGAAACGGC GGGCTTCAAC TCTCAAACCG ATGCGTTGCT AGAAATAGCC
GTCACGCTGT TAAAAATGGA TGATGAAGGC TTGCTCGGGA TTGATAAAAC CCTGCATTTC
AACATTGAGC CCTTCGAAGG CGCAAATTTA GAGCCCGAAG CTCTGGCCTT TAATGGTATT
GATCCCACCA ACCCATTACG GGGCGCCGTA AGCGAAAAGG AAGCTTTTTT AGAGATTTTC
AAAGCCGTTA AAAAAGCGCA GAAGGCCTCC GATTGTCACC GCAGTATTAT CGTGGCGCAC
AATGCCGCCT TCGATCATGG TTTTGTGAGT AAAGCCATTG AGCGTTGTGA CTTAAAACGC
TCTCCCTTCC ACCCTTTTGC TACTTTTGAT ACAGCGACAC TCGCAGGTTT AGCTATCGGC
CATACCGTGC TAGCCAAAGC CTGCATCATG GCGGGGATCC CCTTTGATAA TAAAGAAGCT
CATTCAGCAC TTTACGATAC CGAGCGCACG GCTGAGCTGT TTTGCTACAT AGTCAACCGC
TGGAAGCATT TAGGCGGTTG GCCACTCTTA GCCGCTGGTG AGTCAGAGGA TACAGATGGT
GAAGAATAA
 
Protein sequence
MSDISDANKL KHRFRGYFPV VIDVETAGFN SQTDALLEIA VTLLKMDDEG LLGIDKTLHF 
NIEPFEGANL EPEALAFNGI DPTNPLRGAV SEKEAFLEIF KAVKKAQKAS DCHRSIIVAH
NAAFDHGFVS KAIERCDLKR SPFHPFATFD TATLAGLAIG HTVLAKACIM AGIPFDNKEA
HSALYDTERT AELFCYIVNR WKHLGGWPLL AAGESEDTDG EE