Gene Shewmr7_2446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2446 
Symbol 
ID4255772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2897432 
End bp2898304 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content48% 
IMG OID638123121 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_738488 
Protein GI114047938 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.91416e-06 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.274146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCGAA AACTGATATT AGTATCAATT TTATGCGTTC CAGCAACTGC AATGGCAGAG 
TTGCGCCACT ATGTGGCCTC TTTGGGGGAA TCCCAATGGC GAGTTAGTCA AAACAGTCCC
ATTGTGTGCC GTCTTGAACA TGATATTCCC TCCTATGGTA AGGCGATTTT TACCAGTGAA
GCAGGAAAAC AACTAAATCT AAATTTCACT TTAGATATGT GGGTGAAACC GGACCAAGTC
ACCCAAGCTA AGCTGATGAG TAGAGCGCCG AAATGGCGAC CAGGCGTGGT ATCGAAAGAA
ATCACTTCTC TACATTATCA AAAGTATTTT AATGGTGAAG TGCCTAAGCG TGCCGCCTGG
TCTATGTTGA CCGAGTTGAG CCGTGGCATG GAGCCGACGT TTTACTATGC CGATTGGTAT
GATGAGTCCA ATAAAATTGC CGTAGGACTG TCGGCGGCGA ATTTCGGCCG CAAATATGCT
GAGTTTAAGT CGTGTTTATC GCACTTATTG CCCTACAGCT TTGAAGATAT TGCCTTTACC
GTACTTAATT ATGATGAAGG CGGAACGGAT TTAACCCGTT TCTCGCAGCA GCAGCTTTCG
CGTATTCAAG AATACTTGTC CTACGATCCG GATGTGGAAC TGGTGTTAGT CGATGCTTAT
ACCGACAGTT ACGGTGGTCG CTCCGTAAAC CAAAAAGTCT CGGATAAACG CGCCGAGTCG
GTCAAAGATT TCTTTGTCGC CAGTGGGATC CCACAGGATA GGATAGTCAC CGTCGGCCAT
GGTGAGCGCC GTCATGTGGC GTCGAATGAC GATATTGAGG AGCGAGCACT TAACCGCCGC
GTGGTTATCC GGATCAGTAA GCCACTGATG TGA
 
Protein sequence
MWRKLILVSI LCVPATAMAE LRHYVASLGE SQWRVSQNSP IVCRLEHDIP SYGKAIFTSE 
AGKQLNLNFT LDMWVKPDQV TQAKLMSRAP KWRPGVVSKE ITSLHYQKYF NGEVPKRAAW
SMLTELSRGM EPTFYYADWY DESNKIAVGL SAANFGRKYA EFKSCLSHLL PYSFEDIAFT
VLNYDEGGTD LTRFSQQQLS RIQEYLSYDP DVELVLVDAY TDSYGGRSVN QKVSDKRAES
VKDFFVASGI PQDRIVTVGH GERRHVASND DIEERALNRR VVIRISKPLM