Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2419 |
Symbol | |
ID | 4257494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2862486 |
End bp | 2863955 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638123087 |
Product | peptidase M48, Ste24p |
Protein accession | YP_738461 |
Protein GI | 114047911 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.339461 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00116652 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGCGTAATT TGACGTTTTT GACCCGATGT AAACCCCTTG CGGCGAGTGT ACTTTCATTA ATGTTACTCG GTGGAGCCGC AAAGAGTTTT GCCAACAACG ACTTGCCCGA CTTGGGCACC GCCGCCGTCA ATACCTTCAG CCTAGAAAAA GAAATGGTCT ATGGCGATGC CTATATGCGC GTGATTCGCT CATCGGCACC CATGCTGAAC GATCCGGTAT TGAGCCAATA TTTGACTGAA CTGGGCAATA AATTGGTCGC CCACGCCACG GGAGTTAAAA CGCCCTTTTA TTTCTTCTTA CTGCAAAACG ATGAGATTAA CGCCTTTGCC TTCTTCGGCG GCCACGTTGC AGTACACACA GGGTTATTCC TTAACGCCGA TAACGAAAGT GAGCTGGCCT CAGTGCTCGG CCACGAAATT ACCCACGTGA CCCAACGTCA CTTGGCGCGC TCCCTCGAAG CACAGCAAAA AAGTGGCCCG GCGACCGTTG CAGGCCTACT CGGGGCGATT CTATTAACCA TCGCCGTGCC GCAGGCGGGG ATGGCCGCGC TGGCAACCAC TCAAGCCATG GCGACCCAAT CGAAGATCAA CTATACCCGT CTGCATGAAA AAGAAGCCGA CCGGATTGGC ATGCAGATTC TGGTCGATGC GGGCTTTGAC CCTAATGCGG CCGCCGATTT CTTTGGTAAA CTCGCCAGTC GCTACCGTTT TACCACCACG CCGCCACAAA TGTTGCTGAC TCACCCATTA CCCGAGTCAC GGATCTCCGA AGCGCGCGAT CGCGCCCACC AGTATCCACA CCGCTATGTG CCGGATAATC TCAACTTCCA GCTCGCTAAA GCCCGTATTC AGGTGCGTTT TTCGAGTTAC AGCGACGATG CGGTATTGAG CATGTTTGAA AAGCAGCTCA ATAAGCAAAC CTACGGCTTT AAAGAGGCCG CCCTCTACGG CAAAGCCTTA GCACTATTCA GATTGAAGAA ATTTGATGAG TCCGAAAAGA TTATCGATGA ACTGTTAAAA ATCGATGATA ACAACTTGTT TTATATCGAT ACCAAAACGG ATTTGTTCAA CGAGCGCAAG GATTATGCTA AGGCGACTAA GTTACTCGAA GCCCAGCGTA AGATGAAACC CACATCGCAG GTGATTAACG CGAACCTAGC CAATATCTAT ATTGAGGCAG GTGAGCCAGC GAAGGCTATC CCGTTGCTAG AAGATATAAT TTTCCTCGAT AAGCAAAATC AACTGCCCTA TCAACTGCTC AATCTTGCCT ATAAAAAATT GGGCAATCAG GGAATGGAGT ATTTCTCCAA TGCCGAGTTG ATGGCGCTGG GGGCTAACTA TAAAGGGGCT ATCGATCAAT TGAACTTTGC CTACCGCGCC TCGGAAGGCA ATCCATTACA ACTGGCACGA ATCGAAGCTC GTATCCGCCA ATTTAAACAA GCGGATAAAG AGATGGATGC CCTGAAGTAA
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Protein sequence | MRNLTFLTRC KPLAASVLSL MLLGGAAKSF ANNDLPDLGT AAVNTFSLEK EMVYGDAYMR VIRSSAPMLN DPVLSQYLTE LGNKLVAHAT GVKTPFYFFL LQNDEINAFA FFGGHVAVHT GLFLNADNES ELASVLGHEI THVTQRHLAR SLEAQQKSGP ATVAGLLGAI LLTIAVPQAG MAALATTQAM ATQSKINYTR LHEKEADRIG MQILVDAGFD PNAAADFFGK LASRYRFTTT PPQMLLTHPL PESRISEARD RAHQYPHRYV PDNLNFQLAK ARIQVRFSSY SDDAVLSMFE KQLNKQTYGF KEAALYGKAL ALFRLKKFDE SEKIIDELLK IDDNNLFYID TKTDLFNERK DYAKATKLLE AQRKMKPTSQ VINANLANIY IEAGEPAKAI PLLEDIIFLD KQNQLPYQLL NLAYKKLGNQ GMEYFSNAEL MALGANYKGA IDQLNFAYRA SEGNPLQLAR IEARIRQFKQ ADKEMDALK
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