| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2410 |
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| Symbol | |
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| ID | 4257343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2854288 |
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| End bp | 2855370 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638123078 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_738452 |
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| Protein GI | 114047902 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000315716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00636413 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAA TCATAATTAT CATCGCTATT TTGGCTGCGG GCTGGTTTGG ATACCAAAGT
ATGCAACCCC AAGCACCGCA GAAAGCTAAT GTTAAGCTCA CCCCTAATGT GGTCATCGCG
ACTGCCGCTA TGGCGCCCGT GCGTGACGAA GTCGAAGCCA TAGGCACCAA CAAGGCCTAT
GAGTCTGTCA CTATCACGCC TAAAGTCACC GATGTAGTCA CCTCACTCAA GTTTGATGAT
GGCGATATCG TCAAAAAGGG CGACTTATTG GTGCAACTGC AAAATGCCGA GCAGATAGCC
AAAGTGAAAG TGGCGCAGGT GAAGGTGAGT GACAACCAGC GTGAGTTAGC GCGGATCAGC
TCTCTGGTGA CCAGCCGCAC TGTGGCGGAG TTAGAACGTG ACCGCCTGCA AACCTTAATC
GATACCACCC GCGCGGAGTT AGAGCAGGCA CAATCATCCC TGAATGATCG CAGCATAGTG
GCGCCCTTTA ATGGTCGTTT AGGCCTGCGC CAAGTGAGTG TGGGTAGTTT AGTGACTCCG
GGTACTGAGA TCACCACGCT CGATGATATC TCTAAGATTA AATTAGACTT TTCGGTGCCT
GAGCGCTTTA TTCAAGACTT ACAGCCCGGC AAACAAGTCG AAGCCAAGGC TGTAGCGTTT
CCCGATGAAA TTTTTAAAGG CAAAGTGATT TCTATCGATA GCCGTGTTAA TCCAACCACT
CGCGCCGTGA TTGTGCGCGC CGAAATCCCA AATCCGGATT TACGTTTACT GCCCGGCATG
CTGATGAAGG TCAAACTCAT CAAGCGCAGC CGTGAGGCCT TGATGTTGCC TGAGTCGGCG
ATTATCCCAA TCCAAAAAGA GCACTTTGTT TACAGCGTCA ATAAGGACAA TGTGATTGAG
CGTAAGCAAG TCACCATTGG TATTCGTACC CGCGGCTGGG TCGAAATCCT CGGTGGTTTA
GAGATTGGTG AAAATGTGGT GATCCGCGGG CTACTCAAAG TGCACCCAGG CGATGTGGTC
AAAACCGAAT TGGCTGAGAA GTTTAGCTAT CTTTCCGATG CTAATGCGGA GCCAAGTGTA
TGA
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| Protein sequence | MKKIIIIIAI LAAGWFGYQS MQPQAPQKAN VKLTPNVVIA TAAMAPVRDE VEAIGTNKAY
ESVTITPKVT DVVTSLKFDD GDIVKKGDLL VQLQNAEQIA KVKVAQVKVS DNQRELARIS
SLVTSRTVAE LERDRLQTLI DTTRAELEQA QSSLNDRSIV APFNGRLGLR QVSVGSLVTP
GTEITTLDDI SKIKLDFSVP ERFIQDLQPG KQVEAKAVAF PDEIFKGKVI SIDSRVNPTT
RAVIVRAEIP NPDLRLLPGM LMKVKLIKRS REALMLPESA IIPIQKEHFV YSVNKDNVIE
RKQVTIGIRT RGWVEILGGL EIGENVVIRG LLKVHPGDVV KTELAEKFSY LSDANAEPSV
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