Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2301 |
Symbol | |
ID | 4256472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2726219 |
End bp | 2727637 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638122971 |
Product | nitrite transporter |
Protein accession | YP_738346 |
Protein GI | 114047796 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.123404 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTAT CTCAAACCAC CCCAAAATCA CGTCAGGGAG TCATACATGA TTGGCACCCA GATGATAAAA AATTTTGGCT ACTCAAAGGT AGTAAAATTG CGAGAAAAAA CTTAATAATT TCTATATGTT GTCTACTACT TTCATTTTCT GTTTGGATGT TATTTAGTGC GGTTGCTGTC AATCTTAATA AAGTGGGTTT TAACTTTACT ACTGACCAAC TCTTTTTATT AACGGCTTTA CCTTCGGTAT CAGGTGCATT ATTGCGCGTA CCTTATTCGT TTGTCATACC CATTTTTGGA GGCCGCCGTT GGACAGCTTT CAGTACCGCC TTGCTAATGA TTCCGAGTCT TTGGTTAGGA TTTGCTGTGC AAGATAATAC AACCCCCTTC AGCATATTTG TCATTATTGC ACTGTTATGT GGGTTTGGTG GTGCCAATTT TGCTTCAAGT ATGGCCAATA TTAGTTTTTT CTATCCTAAG GATAAACAAG GTAGTGCATT AGGGTTAAAT GGAGGATTAG GAAATCTAGG TGTCAGCGTT ATGCAACTAT TCGTCCCCCT GATCATCTCA ATAGGAATCT TCAATATCTT TGGAGAAAGT GCTGATATTC AAAGCAATGG CAACACCATT TGGTTACAAA ATGCCGCTTG GGTTTGGCTT CCCTTCTTAT TAATCAGTAC TCTGATGGCT TGGTTCGGAA TGAATGATAT CGCCGCAGCT AAAGCATCAA TCAAACAACA ACTTCCTGTA TTAAAGCAAG GTCATCTGTG GATTTTGAGT TTACTGTATC TCGCTACATT TGGATCATTC ATCGGCTTTT CAGCAGGCTT TGCGATGCTA ACAAGTACCC AATTCCCAAA TATCGATATT TTGCATTTCG CTTTTTTAGG CCCTTTAGTG GGTGCATTAA TGCGCCCTGT TGGTGGCATT TTATCCGATA AATGGGGTGG TATTAATGTC ACCATGGTAA ATTTTATGTT AATGGGACTC TTTGCCACAT TACTATTTTT TACCCTTCCC ACAGCAGAAA CCGATGGGCA TTTTAATGCT TTCTTCATAT TATTTTTGGC GCTTTTTGCT ACCGCAGGAT TAGGCAGTGG CTCAACATTT CAAATGATTT CAGTCGTTTT TAGACGATTA ATCGTGACAA GTGTTAAAGC AAAAGGGGGA AGTGACGCCC AGGCCCAAGT AAAAGCAGCA ACAGATACTG CTGCCGCATT AGGGTTTATC TCAGCCATAG GTGCTATTGG AGGTTTTTTC ATTCCCAAGG CATTCGGAAC ATCATTAGCA TTAACCGGTT CTCCCGTTAA TGCCATGAAG GTCTTTATCT TTTGTTATAT TGCTTGCCTT TTTATCACAT GGTTGATTTA TGGGCGAAAA ATTAAAACTA TGGCCACTGA AAAGATTTCA ACTGTTTAG
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Protein sequence | MALSQTTPKS RQGVIHDWHP DDKKFWLLKG SKIARKNLII SICCLLLSFS VWMLFSAVAV NLNKVGFNFT TDQLFLLTAL PSVSGALLRV PYSFVIPIFG GRRWTAFSTA LLMIPSLWLG FAVQDNTTPF SIFVIIALLC GFGGANFASS MANISFFYPK DKQGSALGLN GGLGNLGVSV MQLFVPLIIS IGIFNIFGES ADIQSNGNTI WLQNAAWVWL PFLLISTLMA WFGMNDIAAA KASIKQQLPV LKQGHLWILS LLYLATFGSF IGFSAGFAML TSTQFPNIDI LHFAFLGPLV GALMRPVGGI LSDKWGGINV TMVNFMLMGL FATLLFFTLP TAETDGHFNA FFILFLALFA TAGLGSGSTF QMISVVFRRL IVTSVKAKGG SDAQAQVKAA TDTAAALGFI SAIGAIGGFF IPKAFGTSLA LTGSPVNAMK VFIFCYIACL FITWLIYGRK IKTMATEKIS TV
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