| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2285 |
|---|
| Symbol | |
|---|
| ID | 4257135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 2708654 |
|---|
| End bp | 2710210 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638122955 |
|---|
| Product | Ppx/GppA phosphatase |
|---|
| Protein accession | YP_738330 |
|---|
| Protein GI | 114047780 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0248] Exopolyphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGTTGCCA CACATTCACA ACCGCGACAC TTTGTCGCTA TCGACATGGG CTCAAACAGT
TTTCATCTGG TTATCGCCCG TGAGCAAGAC GGCAGCTTGC AAATATTACA CAAAGAAAAA
CAACAAGTTC AGTTAGCGAC GGGTCTCAAT GCGCAGAACA TCCTCAGCAT GGATGCTATC
GAGCGCGGCC TCAATTGCCT ACGGGACTTT AATCAGCGTT TTTCCAACCT TGACCAAGCC
CAGGTACGTT TAGTCGCCAC CCACACCCTA AGGGTAGCCA AAAACCGTGA GCAGTTTATT
GAAGCGGCGC TCAGCATTAT GCCCTACCCG GTGGAGGTGA TTTCTGGCCA CGAGGAAGCG
CGCCTCATCT ATAACGGCAT TGCCCAAAGC CAAGTGCTTG GCAAACGCAA TATCGTTATC
GACATTGGTG GCGGCTCGAC CGAAGTGGTA CTCGGGCAAA AAAATACCCC CACCCATTTA
TCGAGCCTGC GTTGCGGCTG CGTGAGTTTT AACGAGCGCT TTTTTATCGA TGGCCAAATC
ACACCGGCCT CATTTCGCGG AGCACAAAGC GCCGCCGATA AACAATTCGC CTCACTGTCG
AAGGAATATT TCAGTGGCGA TTGGGACTTA GTGCTTGGCA GCTCTGGCAC AGTCAAAGCC
ATTTGCGAAG CGATTCAGGA AGATCATGGC GATGAAATCG TCACCCTCTC CCGCCTCAAA
CAATTAAAGC TGAAACTGAT TAAGTGCGGA CACATCAGCC AAGTGCACTT TGCTAATGTC
GATGATAAAC GCACACCGCT CGTGCCCGCA GGCCTTGCCA TTTTAATCAG CTTTTTTAGG
CGCTTACCCA TTGAGCAATT GGAGTTTAGC CCGGGCGCCC TGCGCGAAGG CGTACTCTAC
GAATTAGCGA AAATCGGCCA ATATCAAGAT ATTCGCCACC GTACTGTTGA AAGTATTGCC
CAGCTTTACC ATGTGGATAT GCCCCATGCG GCCAAAGTGC GGGACACCGC CATGGCGCTG
TTTGAGCAGG TCGCCGATGA ATGGGGATTA AGACCCCATG CACGTTTGCT GTCCTACGCC
GCCACCTTGC ATGAGATAGG GCTTCACATT AACTCAAAGG CATTGCATAA ACACGGCGCT
TATATCATTA GCAACAGCGA CTTACCCGGT TTTAGCGAGG CGCTGCAAAA GGATTTAGCC
AGACTGATTG CCAACCACCG TAAGAAACCC AATGAATTAC TACTGGCCGA ATTAGAGCCT
GGCCACAAAC TCACCCTCAT TCGTCTCGCC TGTCTGCTGC GTTTGGCGGT GTTAGTGCAT
TTAGGCCGAA TTGCCAAAGC CCTAGTGCTT GAGAAAATCC AAGTGGTTCC AGATGGGCTC
ATGCTAGTGC TACCCAGCCA TAAACGTAAA ATCAGTTTGT TTATGAAAGA TTTGCAGCGT
GAACAAAAAC AGATGGCGGC TTTAGGAATG CAGCTGCGTT TAGTCTCTAG CCTTGGGCTG
AATCAGGATA AAAATCTCGA GGTAAAAGAC GATACACTGA ACGCCGTCGC CAGCTAA
|
|---|
| Protein sequence | MVATHSQPRH FVAIDMGSNS FHLVIAREQD GSLQILHKEK QQVQLATGLN AQNILSMDAI
ERGLNCLRDF NQRFSNLDQA QVRLVATHTL RVAKNREQFI EAALSIMPYP VEVISGHEEA
RLIYNGIAQS QVLGKRNIVI DIGGGSTEVV LGQKNTPTHL SSLRCGCVSF NERFFIDGQI
TPASFRGAQS AADKQFASLS KEYFSGDWDL VLGSSGTVKA ICEAIQEDHG DEIVTLSRLK
QLKLKLIKCG HISQVHFANV DDKRTPLVPA GLAILISFFR RLPIEQLEFS PGALREGVLY
ELAKIGQYQD IRHRTVESIA QLYHVDMPHA AKVRDTAMAL FEQVADEWGL RPHARLLSYA
ATLHEIGLHI NSKALHKHGA YIISNSDLPG FSEALQKDLA RLIANHRKKP NELLLAELEP
GHKLTLIRLA CLLRLAVLVH LGRIAKALVL EKIQVVPDGL MLVLPSHKRK ISLFMKDLQR
EQKQMAALGM QLRLVSSLGL NQDKNLEVKD DTLNAVAS
|
|---|
| |