Gene Shewmr7_2238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2238 
Symbol 
ID4257002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2657068 
End bp2657955 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content49% 
IMG OID638122908 
Producthydroxyacylglutathione hydrolase 
Protein accessionYP_738283 
Protein GI114047733 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID[TIGR03413] hydroxyacylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.29962e-06 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.30778 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATACC AACAGTCGCC AAATGGACCC CTCTTATGGA TAATAACCCT ATCTTCAAAT 
CGAAATACAG CGATCGGCGG TGCTATGCTC ACTATAACAG CGATTAATGC CTTTAATGAC
AATTATATCT GGGTGTTGCG ACAAGACTCC CAGCAAAATG TGTATGTGGT TGACCCGGGC
GATGCCAATG TCGTACTCGA CTACTTACAC AAACATCAAC TCACGCTTGC AGGTATTTTG
ATAACCCATC ACCATAGGGA TCACACTGGA GGGATCGCCG CCCTCGCGGC CCATGTTGAG
CAGACAACAG GCCATACCTT AGCGGTTTAT GGCCCACAAA GTGAAGCCAT TCAAGGCATC
AATCTGCCAA TTGACCCAAA GCCTAGCGAT ACACTCACCC TGCCCTTTAT CGATGCACCA
GTGCATATCT TGTCCGTGCC TGGTCATACG GCTGGGCATA TAGCCTATCT GGTTGATGGC
GCATTATTTT GCGGTGATAC GCTTTTTAGC GCGGGCTGCG GCCGTTTATT TGAAGGCTCG
CCAGCGCAGA TGTGGCAATC CTTAAGTCTG CTCGCGGCGC TGCCCGATAC AACCCGCGTG
TACTGCGCCC ATGAATACAC CCTCGCCAAT CTGAAATTTG CCCAAGCGGT CGATACCGAT
AATGAAGCAC TCAAGGCCTA TGTGAAACGC GCCAACGACC TTCGCGCCCA AAACAAAGCC
ACCATTCCCT CAACGATAGA ATTAGAGCGG GCAATTAATC CCTTCCTGCG TCCATTAGCG
CCCACCATAG TCAACAGCAT AAAAAATCAG TTTTGTGATC AAGATCTGAC TAAAACAGAT
GAACTGACCT GTTTTACCCT ACTCAGGCAG TGGAAAGATA TTTTCTAG
 
Protein sequence
MQYQQSPNGP LLWIITLSSN RNTAIGGAML TITAINAFND NYIWVLRQDS QQNVYVVDPG 
DANVVLDYLH KHQLTLAGIL ITHHHRDHTG GIAALAAHVE QTTGHTLAVY GPQSEAIQGI
NLPIDPKPSD TLTLPFIDAP VHILSVPGHT AGHIAYLVDG ALFCGDTLFS AGCGRLFEGS
PAQMWQSLSL LAALPDTTRV YCAHEYTLAN LKFAQAVDTD NEALKAYVKR ANDLRAQNKA
TIPSTIELER AINPFLRPLA PTIVNSIKNQ FCDQDLTKTD ELTCFTLLRQ WKDIF