Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2236 |
Symbol | |
ID | 4257000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2655310 |
End bp | 2656224 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638122906 |
Product | LysR family transcriptional regulator |
Protein accession | YP_738281 |
Protein GI | 114047731 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000156139 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.533815 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAATAA CCTTAAGGCA ACTTGCGGTA TTTGAAGCCG TTGCACGCAG TGGGCAAGTA GCCAAAGCGG CGGAGCAGGT TAATCTCTCG CCTCCAGCGA CCTCAATGGC CTTGGCCGAA TTAGAAAAGC AGCTTAACGC CCGTTTATTT GAACGGATTG GCAATAGGTT GCAGCTCAAC TCCCAGGGTA ATCTGTTACT GCCACTGGCG ACGGACTTGT TGCATCGAGT CGAGCAAATC GAGCAGGCGT TCACCCGCCA AGACGGCGAT TTGGTCGGGC ATTTAAGCGT GAGTGCCAGT TCGACTATCG GCAACTATTT AATGGCGAAG GCGGCGGTGG CCTTTTGTCA GCAACACACT CAGACCCATG TAGATGTGGC GATTACCAAT ACCCAAGATG TTATCCAATC GGTCGCGCAA TTTCGCGCCG AAATGGGCTT TATCGAAGGG CATTGCACCG ATAACCGCTT GAATATTGAG CCATGGCATA AGGACAGGTT ATTGGTCTTT TGCCATCCCG CCCATCCTCT CGCGGGGCAA ACGGTCAAAC CCGTTGAGGT CAAAGGCCTA TCATGGGTAC TAAGGGAGGA AGGCTCGGGT ACGCGGGAGT ATTTTGTTAA TGCAGCCAAT GAGTTAGGGA TGCAGCCCGA GGCGAAGTTT TGTTTTACTA CCCCCGATGC TATCAAGCTT GCGGTAAAAC AAGGGGCGGG ACTTGGCGTG CTCTCTGAAT TGGCGCTGGA TAAAGACATC AGCCGAAAAG AGTTAGCCCT AGTCACCATC GAAGGCTTAG TGCTAGAGCG TCAGTTTTAC CGCATCACCC ATAAGAGCCG TCAAGCAACC TCGCTAGGAT CGGCCTTTGT GCAGTTTTGC AGTAATTTTT TTCATTTATC TCGGGAATTA ACGGCGCAAC GTTAA
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Protein sequence | MRITLRQLAV FEAVARSGQV AKAAEQVNLS PPATSMALAE LEKQLNARLF ERIGNRLQLN SQGNLLLPLA TDLLHRVEQI EQAFTRQDGD LVGHLSVSAS STIGNYLMAK AAVAFCQQHT QTHVDVAITN TQDVIQSVAQ FRAEMGFIEG HCTDNRLNIE PWHKDRLLVF CHPAHPLAGQ TVKPVEVKGL SWVLREEGSG TREYFVNAAN ELGMQPEAKF CFTTPDAIKL AVKQGAGLGV LSELALDKDI SRKELALVTI EGLVLERQFY RITHKSRQAT SLGSAFVQFC SNFFHLSREL TAQR
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