Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2230 |
Symbol | |
ID | 4256994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2645436 |
End bp | 2646956 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638122898 |
Product | flavocytochrome c |
Protein accession | YP_738275 |
Protein GI | 114047725 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR01813] flavocytochrome c |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.158762 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAAAT ATGATCTGCT AGGACGCCGT AATTTTATTA AAGGCTTGGG TGCCGCTACA GGTGTTGCAA TTGCAGCACC TGCTATGGCG TTATCAGAAA AGGCCGACGG TGTTAAATGG GATAAAGAAG TTGAAGTGCT AATTGTGGGA TCTGGTTTTG CAGGATTGGC TGCAGGTATA GAGGCTATTC GCAAAGGCGC TAAAGATGTA CATATATTTG AAAAAATGTC TTATTTCGGC GGTAACTCTG CAATTAACGG CGGTTTATTC GCGGCACCTG GGACGCCAAT GCAGAAAAAA GAAGGCATTG ATGATTCAGT TGAAAAAATG GTAGCAGATC AAATTGCATC TGGCCGCGGT ATTGCGGACG AGAGCTTATT ACGGCATGTG GCTTCACATG CTGTAGAGGC GCTGCAAATG ACGTTAGATG CAGGAGCTGA ATTTCATCCA TATTTGCAGC AACTGGGTGG TCATTCCGTT GCTCGAACTT ACCAAACGAG TGTGAGTTGT GGTGCCGGTA TTACTCAACC TCTGCTAAAA GAGTGCCGCA GGCTAGGTGT AAAGACCCAT AACCGCGCTA AGTTTGAAGG TTTCATTCTG GGGGGTAAGG GAAATGTTGT CGGTGTGAAA ATGCGCGAAA ACTATCACTT TGCTGAAGAT CAACCAGGGA AGGTTGTTAA TATTCGAGCA TTGCGAGGCG TGCTTATGGC GACCGGCGGC TTTGCGCAGA ATATCGATTT TCGGATGGCG CAAGATCCGA CGCTAACCTC TGAAGTAGGC TGTACCAATG CGCCTGGCGC AACGGGTGAG GGCATGTTGG AAATGTTCCG CTTAGGGGCA GTGCCTGTCC ACCTTGCCCA TATCCAATCT GGGCCATGGG CTTCGCCCGA TGAAGGCGGC TTTGGCTATG TATCTAATTA TTCGATTTTT AACTTCCCTC ATTCAATTGC GATTAACTGT ATGACTGGTA AACGCTTTAT GGATGAGATT GCGGACCGGA AAACACGAGC CGATGCGGAG TTGGCGTGTC GTGATGCTAA AGGTGAACCG CTACCGCCCA TTTTAATTAC GAGTTTTAAA GATTCGAAGC AGCATCCTAA TACTGCCAAA GTACTTAAAT ATAATGTGGG TTGGAAGTTC GATACTCTTG AGGAGTTAGC GAAACACTTT GGCGTACCAA TCGAGCCATT AAAAGCGCAG ATTGAAGAGT ACAACAGCTA TGTCAAAACG GGCGTTGATA AGCAATTTAA CAAGAATATG ACAAAAGCCA AGGATAAATA TATTGAAGCG CCATTTACCG TAGTTCGTCT ATGGCCAAAA GTGCATTACT GCCAAGGTGG TGTGCAGGTC AATACTAAGG CGGAAGTGAA AGACAGCTTT ACGGGTCAAC CTATCCCAGG TTTGTATGCT GCTGGTGAAG TCTGTGGTGG TATTCACGGT GTTAGCCGTT TGGGGAGTTG CTCAATTCCA GAATGTATGG TGATGGGTAT GACAGCCGCC CGCAGCATGA TGCAAGCCTA G
|
Protein sequence | MSKYDLLGRR NFIKGLGAAT GVAIAAPAMA LSEKADGVKW DKEVEVLIVG SGFAGLAAGI EAIRKGAKDV HIFEKMSYFG GNSAINGGLF AAPGTPMQKK EGIDDSVEKM VADQIASGRG IADESLLRHV ASHAVEALQM TLDAGAEFHP YLQQLGGHSV ARTYQTSVSC GAGITQPLLK ECRRLGVKTH NRAKFEGFIL GGKGNVVGVK MRENYHFAED QPGKVVNIRA LRGVLMATGG FAQNIDFRMA QDPTLTSEVG CTNAPGATGE GMLEMFRLGA VPVHLAHIQS GPWASPDEGG FGYVSNYSIF NFPHSIAINC MTGKRFMDEI ADRKTRADAE LACRDAKGEP LPPILITSFK DSKQHPNTAK VLKYNVGWKF DTLEELAKHF GVPIEPLKAQ IEEYNSYVKT GVDKQFNKNM TKAKDKYIEA PFTVVRLWPK VHYCQGGVQV NTKAEVKDSF TGQPIPGLYA AGEVCGGIHG VSRLGSCSIP ECMVMGMTAA RSMMQA
|
| |