Gene Shewmr7_2180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2180 
Symbol 
ID4256121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2581348 
End bp2582439 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content51% 
IMG OID638122848 
Productimidazole glycerol-phosphate dehydratase/histidinol phosphatase 
Protein accessionYP_738225 
Protein GI114047675 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0131] Imidazoleglycerol-phosphate dehydratase
[COG0241] Histidinol phosphatase and related phosphatases 
TIGRFAM ID[TIGR01261] histidinol-phosphatase
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCAG TATTTACCCC AAATGTCGCC CAGAAAATAC TTTTTATCGA CCGCGATGGC 
ACCTTAATTG AAGAGCCCAT TACCGACAAA CAGGTTGATA GCCTCGCCAA ACTGGTATTC
GAGCCCCAAG TGATCCCCGC CTTACTGCGC CTGCAAAAAG CTGGGTTTAG GTTGGTGATG
GTCAGCAATC AAGATGGACT CGGTACCCCT TCCTTCCCGC AGGAAGATTT CGATGCGCCG
CACAATATGA TGATGCAAAT CCTCTCCAGC CAAGGGGTTA GGTTTGAAGA TGTACTCATC
TGCCCGCACT TTAACGATGA AAATTGTAGC TGCCGCAAAC CAAAACTAGG GCTGGTAAAA
GACTTTTTGA CCCAAGGGAC CATCGATTTT ACTCAGTCTG CCGTGATTGG TGACAGACAC
ACAGATGTGG AACTGGGCAA TGCCATGGGG ATTAAAAGCT TTCAATATCA GCGTGGCAGC
CTAGGCTGGG ACGCGATTGC CGATGCCTTA CTCAACAAGG GCCGCACCGC GACTGTAGTA
CGCACCACCA AGGAAACCGA TATTCGCGTG ACTGTCGATC TCGACAATGC CAGCAAAGGC
GCCATCAACA CTGGCATTGG TTTCTTCGAC CATATGCTGG ATCAAATCGC CACCCACGGC
AACTTCAAAA TGGAGGTGAA TGTCGATGGC GATCTCGAGA TAGACGATCA CCACAGCGTT
GAAGACACGG CATTGGCTAT TGGGGATGCA CTGCGCCAAG CACTTGGCGA TAAACGCGGT
ATTGCCCGTT TTGGTTTTAG TTTGCCGATG GATGAGGCTA AGGGCGAATG CTTACTCGAT
CTTTCCGGCA GGCCGTTTAT TAAATTCGCC GCCCAATTTG AACGGGAAAA AGTCGGTGAA
ATGGCCACCG AAATGGTGCC GCACTTTTTC CGATCTTTTG CCGATGGCCT ACGCTGCACC
CTGCACGTCG CAGCCGAGGG AGACAACGAT CACCACAAGG TCGAAGCGCT ATTTAAAGTG
CTTGGCCGCG CGCTGCGTCA GGCAGTCAAA GTTGAAGGTG ATGTGTTGCC ATCGAGTAAA
GGCGTGCTCT AA
 
Protein sequence
MNPVFTPNVA QKILFIDRDG TLIEEPITDK QVDSLAKLVF EPQVIPALLR LQKAGFRLVM 
VSNQDGLGTP SFPQEDFDAP HNMMMQILSS QGVRFEDVLI CPHFNDENCS CRKPKLGLVK
DFLTQGTIDF TQSAVIGDRH TDVELGNAMG IKSFQYQRGS LGWDAIADAL LNKGRTATVV
RTTKETDIRV TVDLDNASKG AINTGIGFFD HMLDQIATHG NFKMEVNVDG DLEIDDHHSV
EDTALAIGDA LRQALGDKRG IARFGFSLPM DEAKGECLLD LSGRPFIKFA AQFEREKVGE
MATEMVPHFF RSFADGLRCT LHVAAEGDND HHKVEALFKV LGRALRQAVK VEGDVLPSSK
GVL