Gene Shewmr7_2158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2158 
Symbol 
ID4257639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2554666 
End bp2555244 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content49% 
IMG OID638122826 
Producthydrogenase expression/formation protein 
Protein accessionYP_738203 
Protein GI114047653 
COG category[C] Energy production and conversion 
COG ID[COG0680] Ni,Fe-hydrogenase maturation factor 
TIGRFAM ID[TIGR00072] hydrogenase maturation protease
[TIGR00140] hydrogenase expression/formation protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.6852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.309785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAT TGCTACTGGG TATTGGCAAT GTCCTGTACG CCGATGAAGG CATCGGCGTA 
CATTTTGTCA ATTACATCGC TGAGAATTAT CAGTTCACAC ACGAGTCCCA CCAGCTGGAG
ATGCTCGATG GCGGCACCTT AGCCCAGGGA CTCATTCCGA TTATTTGCCA ATACGATTAT
TTGATCGTAG TCGATACCGT CAATGCCAAC GGTGTCGAGG CTGGCGAAGT GTATTTCTTT
GATTTTGATA AAGCCCCGCA GGAAATCGAC TGGCAAGGAA GCGCCCATGA AGTCGAAATG
CTGCAAACCC TCAATATGAT GGAAATGGTG GGCGACAGAC CCAAAACCTT TGTGTTAGGT
GTCACCCCTA CCGTGTTAGA ACCGATGACA CTGGGACTGA CCACTAAGGT GGCCGCCGCC
GTCCCCTTGA TGGAACAAAC CCTGTTAACC CACTTAGCCT CCCTCGGGTT CACCGCGACA
CGCATTGCCG AGCATAGTAT CGATTCGCTG ATCCCCAATT CTTACAAACG TGGCGTCACT
ACTGGTGAAA ATATAGAAGA TGAAACACAT CAGATTTGA
 
Protein sequence
MKILLLGIGN VLYADEGIGV HFVNYIAENY QFTHESHQLE MLDGGTLAQG LIPIICQYDY 
LIVVDTVNAN GVEAGEVYFF DFDKAPQEID WQGSAHEVEM LQTLNMMEMV GDRPKTFVLG
VTPTVLEPMT LGLTTKVAAA VPLMEQTLLT HLASLGFTAT RIAEHSIDSL IPNSYKRGVT
TGENIEDETH QI