| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2157 |
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| Symbol | |
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| ID | 4257638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2553984 |
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| End bp | 2554658 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638122825 |
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| Product | Ni/Fe-hydrogenase, b-type cytochrome subunit |
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| Protein accession | YP_738202 |
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| Protein GI | 114047652 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1969] Ni,Fe-hydrogenase I cytochrome b subunit |
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| TIGRFAM ID | [TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.71471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.166064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCATT CTGAAACCCG CATTCGGACA CTGGTTTTTA GTCCCGCGAT ACGGATTTTC
CACTGGCTAC GGGCACTGTC GATTTTAGTG CTGGTGATCA CCGGATTCTA TATCGCTTGG
CCGTTTCTTG TGGCGCCCGA CAGCACGGAT GTATTGGTAC AAGGTTGGGT GCGATTTGCC
CATCTGATCT GCGGTTTTGT GTTGACCGCA GTCACCTTGG TTCGCTTCTA CCTGTATTTT
TTCAGTCGAA GCGATATCGA GCGACGCTCA TTCCGTGATG TGATGAGCGT TAAGAGCTGG
ATCACCCAAC TGAAATCCTA CATTTGGATG GGACACTTGC ATAAAGCCGG TGTTTACGGA
CCGCTGCAAT TTGTGACCTA CGTAGCAATC TCCTTCGTGG CACTTGTGAT ATGTATTACT
GGACTCGTGC TGTATGCCAA CGTCTACCAT GAAGGTTTAG GTGGCATGCT TTGGAGCAGC
GCAGCTTGGA TCACGGCGCA AATGGGTGGA CTGGCACAGG TGAGAATTTG GCACCATTAC
CTCACTTGGG CTTTCGTTAT CTTTGTGGTT ATCCACGTCT ATATGGCGGT TTGGTCAGGG
ATACGCTTCA AACATAACTC TGTCGACTCA ATTGTCTCTG GTTACGACTA CCCGAAACCA
GACTCACACC ACTAG
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| Protein sequence | MNHSETRIRT LVFSPAIRIF HWLRALSILV LVITGFYIAW PFLVAPDSTD VLVQGWVRFA
HLICGFVLTA VTLVRFYLYF FSRSDIERRS FRDVMSVKSW ITQLKSYIWM GHLHKAGVYG
PLQFVTYVAI SFVALVICIT GLVLYANVYH EGLGGMLWSS AAWITAQMGG LAQVRIWHHY
LTWAFVIFVV IHVYMAVWSG IRFKHNSVDS IVSGYDYPKP DSHH
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