| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2133 |
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| Symbol | |
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| ID | 4255548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2520859 |
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| End bp | 2521446 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638122801 |
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| Product | periplasmic nitrate reductase subunit NapC |
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| Protein accession | YP_738178 |
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| Protein GI | 114047628 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | [TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000264012 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTAGATA AACTCAAAAA GATCTGGCAA GTTCTCAATC GTCCGAGTGT GCACTACAGT
TTAGGGTTTT TAACCTTAGG TGGCTTTGTG GCGGGGGTGA TCTTCTGGGG GGGCTTTAAC
ACCGCGCTTG AAGCCACCAA CAAAGAGGCC TTCTGTATCG GTTGCCACGA AATGGAAAAT
AACGTCTATC AAGAGTTACA GTCGACTATC CATTTCACTA ACCGCAGTGG TGTGCGTGCG
ACTTGTCCTG ACTGCCACGT GCCGCACAAC TGGACCGATA AGATTGCCCG TAAGATGCAG
GCATCGAAAG AAGTGTGGGG TAAAGTGTTT GGTACCATCA ATACCCGCGA AAAGTTTGAG
AACAAACGTC GCGAGCTGGC CGAACATGAA TGGGAACGGT TAAAGGCAAA CGACTCGCTT
GAGTGCCGTA ACTGCCATAA CTTTACCTAC ATGGACTTTA CCAGACAGTC GCCACGCGCC
GCCCAGATGC ACTCAACATC TTTGGCCAGT GGTGAGAAAA CCTGTATCGA TTGCCATAAA
GGGATTGCCC ACCATCTTCC CGATATGGCA GGGGTTGAAG GCTTCTAA
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| Protein sequence | MLDKLKKIWQ VLNRPSVHYS LGFLTLGGFV AGVIFWGGFN TALEATNKEA FCIGCHEMEN
NVYQELQSTI HFTNRSGVRA TCPDCHVPHN WTDKIARKMQ ASKEVWGKVF GTINTREKFE
NKRRELAEHE WERLKANDSL ECRNCHNFTY MDFTRQSPRA AQMHSTSLAS GEKTCIDCHK
GIAHHLPDMA GVEGF
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