| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2105 |
|---|
| Symbol | |
|---|
| ID | 4258091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 2485558 |
|---|
| End bp | 2486565 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638122773 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_738150 |
|---|
| Protein GI | 114047600 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTATTC AAACGCTGTT ATCGACGGCT CTGGCCAAGC GCCATGATTT TTTACTGCAA
GCAGAACAAG ACCATACCGA TTGTTTTCGG GTGTTCCATG GCACGGTCGA AGGCGTCAGA
GGCTTGAATG TCGATCGCTA CGGCGATAAT TGGTTAGTGC AGAGTTTTCA CCAAACCTTA
ACCGATGCGG AATTAGCTGA AATTGTGGAA GTGCTCACCC AAGAAGTGCC TCTGCCTGTG
GTATATAACG ATCGCTCCGC TGGTCATTCC CGCGTGCTCA ATGCATTAAG CCCTGAACTG
GATGATATTG CCTGTGCTGA GTTGGTGATG CAGGAAAATG GGATTAAATT CACTACTAAG
CTGCGCCACG AAGGACAGGA TCCGCTGCTA TTTCTTGATA TGCGTATTGG TCGTGAATAT
GTTCGGGCAC ACAGCCAAGA TAAAACCGTG CTGAATTTGT TTTCTTATAC CTGTGGTATC
GGAACCGCAG CTGCCATGGG CGGCGCAGAA CGGGTTGTGA ATGTTGACTT TTCCTCCTTT
GCACTCGCCG CAGGGCGAAC CAATGCCGAG TTAAACCAAG TGTCAGAGGT ATGTGAATTT
GTGCAGAGCG ATGCGTTTCC GGCCCTGCGC CAATTAGCAG GTTTAAATGT GGGCGGACGT
CGCAATCAAA AATTGCCGAG TTATCCTAAA TTGCCGCAAA CCCAGTTTGA TCTGGTGTTC
CTCGATCCTC CTCGTTATGC CAAGAGTGCC TTCGGAATTG TCGACTTAGT TAATGATTAC
CAAGGGTTAT TTAAACCCGC GTTATTATCA ACCAAGGTCG GTGGCACCAT CGTGTGTTGC
AATAATGTCG CCAAAGTAGA CCGACAAGAT TGGTTTGATA GCCTAGTACG CTGCGTTGAA
AAACAAGGCC GAGGTGTGAC TGAGCACACT TGGCTCGATC CCCATGAGGA TTTCCCGTCA
TTCGATGATA ATCATCCACT TAAAATTGTC GCGTTGACCT TAAACTAA
|
|---|
| Protein sequence | MSIQTLLSTA LAKRHDFLLQ AEQDHTDCFR VFHGTVEGVR GLNVDRYGDN WLVQSFHQTL
TDAELAEIVE VLTQEVPLPV VYNDRSAGHS RVLNALSPEL DDIACAELVM QENGIKFTTK
LRHEGQDPLL FLDMRIGREY VRAHSQDKTV LNLFSYTCGI GTAAAMGGAE RVVNVDFSSF
ALAAGRTNAE LNQVSEVCEF VQSDAFPALR QLAGLNVGGR RNQKLPSYPK LPQTQFDLVF
LDPPRYAKSA FGIVDLVNDY QGLFKPALLS TKVGGTIVCC NNVAKVDRQD WFDSLVRCVE
KQGRGVTEHT WLDPHEDFPS FDDNHPLKIV ALTLN
|
|---|
| |