| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2077 |
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| Symbol | ruvA |
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| ID | 4257242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2450997 |
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| End bp | 2451614 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638122745 |
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| Product | Holliday junction DNA helicase RuvA |
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| Protein accession | YP_738122 |
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| Protein GI | 114047572 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
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| TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000433363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00159664 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATAGGTC GTTTACGTGG CGTGTTAATT GAAAAGCAAG CGCCAGAGGT GTTGATTGAT
GTCAATGGCG TAGGGTACGA GTTACAGATG CCCCTCACCA GCTTTTATGA GCTTCCCGAG
GTCAATCAAC CGACCACAGT GTATACCCAT TTTGTGGTGC GTGAAGATGC CCAGTTGCTT
TACGGCTTTA TCACTAAACA AGAGCGATCA CTGTTTCGAT TACTCATCAA GGCCAACGGC
GTTGGCCCTA AACTGGCGTT AACGATTCTT TCTGGCATGA CCGCCAGCGA GTTTGTGGGC
TGTGTCGAAC GTGATGATAT AGTGACGCTG GTGAAATTAC CCGGTGTTGG TAAAAAGACT
GCCGAACGTT TATTGGTTGA GATGCGCGAT AAATTGAAGA GCTTGATGGA GGCATCCGTA
GGCTCTGAGC GTGAGTTCGT GCTGCAATCT AACTATTCAC CGGCTCCGAC GGTCAATAGT
GCCGAAGAGG ATGCGATTTC AGCCTTGATC TCCCTAGGCT ATAAACCTCC ACAGGCGAGT
AAAGCCGTTT CTGCCGCCTA TAAAGAAGGC ATGGACAGTG AGACCTTGAT TAAGGCCGCG
TTAAAATCGA TGCTCTAA
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| Protein sequence | MIGRLRGVLI EKQAPEVLID VNGVGYELQM PLTSFYELPE VNQPTTVYTH FVVREDAQLL
YGFITKQERS LFRLLIKANG VGPKLALTIL SGMTASEFVG CVERDDIVTL VKLPGVGKKT
AERLLVEMRD KLKSLMEASV GSEREFVLQS NYSPAPTVNS AEEDAISALI SLGYKPPQAS
KAVSAAYKEG MDSETLIKAA LKSML
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