| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2076 |
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| Symbol | ruvB |
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| ID | 4257241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2449871 |
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| End bp | 2450875 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638122744 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_738121 |
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| Protein GI | 114047571 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000131363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00166911 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTGAAG CAGATAGACT GATCCAGCCG CAGCTGCAAG GTCAAGATGA TGTTATCGAC
AGGGCCATGC GCCCTAAATT GCTCGATGAA TATACTGGGC AGGATGATAC GCGTGCCCAA
TTAAAAGTGT TTATTCAAGC GGCAAAGAAT CGCGAAGAAG CCTTAGACCA TATGTTGATC
TACGGCCCGC CGGGGTTAGG TAAAACCACC TTAGCCATGA TCGTGGCTAA TGAAATGGGG
GTAAATATCA AATCGACGTC GGGGCCTGTG CTTGAGAAAG CTGGGGACTT GGCGGCGCTG
CTCACCAATC TTGAGGCGGG GGATGTGCTT TTTATCGATG AAATTCACCG TTTAAGTCCT
GTTGTCGAAG AAATTCTGTA TCCTGCGATG GAAGACTATC AGCTGGATAT TATGATCGGT
GAGGGGCCAG CAGCTCGCTC GATTAAGTTG GATCTACCGC CTTTTACCTT AGTGGGGGCG
ACCACGCGGG CAGGTGCGTT AACCTCTCCG CTAAGGGCGC GTTTTGGCAT TCCACTTCGA
CTCGAGTTTT ATAATGTCAA AGATTTAAGC ACCATTGTGA GCCGTTCGGC GCAGGTGATG
GGATTGGCCA TTGATAGTGA AGGGGCGATC GAAATTGCCA AACGCTCACG GGGCACCCCG
AGGATTGCCA ACCGTTTACT GCGCCGAGTG CGTGACTATG CGGAAGTGAA ACACGATGGC
GCTGTAACCA AGAAAGTCGC TGAGCACGCG CTCGATTTAC TCGATGTTGA TGGTGAAGGG
TTCGATTATA TGGACCGAAA ACTGCTACTC GCGATTATCG ATAAGTTTAT GGGCGGCCCT
GTGGGGCTTG ATAACCTTGC CGCGGCAATT GGTGAGGAGC GTGAAACCAT TGAAGATGTG
CTCGAACCTT TCCTAATCCA GCAGGGTTTT ATCCAACGTA CTCCACGCGG AAGGATTGCC
ACAAACAGAG CGTATCTGCA TTTTGGCATG ATAAAACCAG AGTAA
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| Protein sequence | MIEADRLIQP QLQGQDDVID RAMRPKLLDE YTGQDDTRAQ LKVFIQAAKN REEALDHMLI
YGPPGLGKTT LAMIVANEMG VNIKSTSGPV LEKAGDLAAL LTNLEAGDVL FIDEIHRLSP
VVEEILYPAM EDYQLDIMIG EGPAARSIKL DLPPFTLVGA TTRAGALTSP LRARFGIPLR
LEFYNVKDLS TIVSRSAQVM GLAIDSEGAI EIAKRSRGTP RIANRLLRRV RDYAEVKHDG
AVTKKVAEHA LDLLDVDGEG FDYMDRKLLL AIIDKFMGGP VGLDNLAAAI GEERETIEDV
LEPFLIQQGF IQRTPRGRIA TNRAYLHFGM IKPE
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