| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2075 |
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| Symbol | |
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| ID | 4257240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2446342 |
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| End bp | 2448909 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638122743 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_738120 |
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| Protein GI | 114047570 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00318528 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00256739 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCAAAA GAACCAAAGT TGCATCGGCT ATTAATTTAG CTGTCGTTAG CTCAATTGCT
GCAGGTACCT TTGTTGCATC AAGCGCATTT GCAGCCGAAG AGGCTGCAAA AGTTGAACGT
ATTGAAGTCA CGGGTTCACG TATTCAACGT CAAGATATGG AAACAGCTTC TCCTGTTACC
GTTATTGATG CAGCTGCAAT CAAAGCCGAA GGCTTCACCT CTGTAGACCA AATGCTACAA
GTTCAAACTT CAATGGCAGG TGCTGCGATT GGTTCAACCA CTAACAACGG TGCAGACGGT
GTTGCTCAAG TTGACTTACG TGGTATGGGC TCGCAACGTA CACTCGTACT ATTAAACGGC
CGTCGCATGG TGAACTCAGG TTCAGGTGCT GACAGTGCAG TGGACTTAAA CTCTATCCCT
GTAGCTATGA TCGCTCGCGT TGAAATCCTG AAAGACGGTG CCTCAGCGGT ATACGGTTCT
GATGCGATCG CCGGTGTAGT GAACATCATC ACTAAGAAAG ATTTCGATGG TTTCCAATTA
GACTTCAACG GTAGCGGCAC CGACAAGGGT GACGGTCAAA ACGGTGATGT CAGTGCTTTA
TATGGTTTCA ATACCGATGG TGGTAACTAC ACCTTTGGTG CGGCTTACTC AGACCGTCGT
GGCGTGATCC AATCGGACCG TAGTTGGACT AAACCTGGTG CTAGCTCTTT TGTACCAAAT
GGCGGACTTG TCGGTAACGT TTTAGATGAA AATGGCCAGC CTGTTCTGGA TGAAGATGGT
GTCAATGAGA AAGAAGTTAA AATTAATCAA GGAGGAAATT GGAGTCCATT AGAAAATGGT
TACAATTTCA CCCAAGATAG TTTTTATCAG ACTCCGAGTG AAAGACGTAG CTTGTTTGCA
AATATGACGC AAGAGCTTGG TAATGATGTG GTGTTAACTG CTGATGCCTT ATACACAAAC
CGTCGCTCTA ACCAACAGTT AGCTCCACAA CCTGCTGATA TTATGCTGAA TGTTTGTGGT
CAAGGTGTTG ACCCAACAAA ATGTGTTACG TTGGATAACT CAATGGCTAC AGCTGGCATT
GTTGCAGATG ATGGCATGGT TAACTATCGC CGTCGTATGA ATGATGTTGG ACCACGTATT
TATTCTCAGG ATACTGATAC TTGGCGTTTA TCTGGTGGTT TAGCGGGTAC TTTAGATGTA
CATACAGGTA TGAACTGGGA CGTTACTTAT ACCTATGGTA AAAACCAGGC TAAAACAGCT
GTTGCAAACT CTATTAATGC TAAAGATGTT GCTAATTCAA TATATGCTGA CCAAGATGTT
TGGTTTAGCG GTGCAGAATT ATCAAACCAA ATTGGTAATG ATGTAAGCTA CACAGAAAAG
GCAAACGGCG GTAATGAGCA ACAAACACTG TCAGCTGGTC TGAACGGTGA GTTATTCGAC
CTGAGCGCTG GTGCTGTAGG TTTCGCTATC GGTGCAGAGT ACCGTCGTGA AAGTGGCTTC
TATAATCCAG ATCCTATTGT TGTTGCGGGT GAAAGTACTG CTTCACAACA AGATCCAACC
GATGGTAACT ACAACGTAAT TTCTATTTTC CAAGAAGTTA GCGTGCCTTT TACTGAAAAA
CTGACGGGTG AATTTGCACT GCGTTTAGAT GATTACTCAA CCTTTGGTAA AGCGACCACT
TGGAAAATCG GTTTAACATA TAATGCAACA GACGAGCTGA TGGTTCGTAC CGTAGCAGCA
ACAGGTTTCC GTGCTCCGAG TGTAAGTGAG CTTTATGGCG GCAACTCAGG TTCATTTGAT
TACCTAACAG ATCCTTGGGG TAAAGAATTA GATGAACAAA TTGAAGTTAA CTATATATCA
GATGCAGATC TTAAGCCTGA AGAATCAGAC TCTTACACTG CTGGTTTAGT GTACTCACCA
AGCTACCTCG ATGGTATGTC AGTGACACTT GACTACTGGC GCTTCAAAGT AACTAATGCA
ATCGCTCGTG CAAACACACA AGATGGTTTA GATGCGTGTT TCGCGGGTGA TACTGCAGCT
TGTGATCAAT TCAATATTGG CGCAGGTGGA GATTTAACAA ACTTGTCGAA TGCGTTAACT
AACGTAGGTT CACAAGACAC TAGTGGTATC GACTTCAACT TAGCCTACAA CTTCGAGCTG
ATTGGCTTAG ATTGGAAAGT AAACAACGAT ACGACTTACT TAGTGAAGTT CGAGCAGGAT
GGTGAAGAAT ACACTGGCAC TATCGACGGT AACTTCGGTG CTTATGCTCG CGTACGTAAC
AACTTCAGTA TCTCTGCAGG TCAAGACGAT TGGAACGTAA TGTACTTCAA CCGTTTCATC
GGCGACATGC GTGACCTGAG CAAAGGTTAC AATGTAGGTG ATATCCTTTA TCACAACATT
TCTGGTACTT ATCATATCAA TGATATGGCA ACTATTAGCT TCGGTGTGAA GAACTTTACC
GATGAAAAAC CATTGACCGT TTCTAACGGT AGTGATGGCG GTACTGTTCC AGAAGTTTAC
GACACTATCG GCCGTACCAT TTACGGTGGT GTAACAGTTA AGTTCTAA
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| Protein sequence | MIKRTKVASA INLAVVSSIA AGTFVASSAF AAEEAAKVER IEVTGSRIQR QDMETASPVT
VIDAAAIKAE GFTSVDQMLQ VQTSMAGAAI GSTTNNGADG VAQVDLRGMG SQRTLVLLNG
RRMVNSGSGA DSAVDLNSIP VAMIARVEIL KDGASAVYGS DAIAGVVNII TKKDFDGFQL
DFNGSGTDKG DGQNGDVSAL YGFNTDGGNY TFGAAYSDRR GVIQSDRSWT KPGASSFVPN
GGLVGNVLDE NGQPVLDEDG VNEKEVKINQ GGNWSPLENG YNFTQDSFYQ TPSERRSLFA
NMTQELGNDV VLTADALYTN RRSNQQLAPQ PADIMLNVCG QGVDPTKCVT LDNSMATAGI
VADDGMVNYR RRMNDVGPRI YSQDTDTWRL SGGLAGTLDV HTGMNWDVTY TYGKNQAKTA
VANSINAKDV ANSIYADQDV WFSGAELSNQ IGNDVSYTEK ANGGNEQQTL SAGLNGELFD
LSAGAVGFAI GAEYRRESGF YNPDPIVVAG ESTASQQDPT DGNYNVISIF QEVSVPFTEK
LTGEFALRLD DYSTFGKATT WKIGLTYNAT DELMVRTVAA TGFRAPSVSE LYGGNSGSFD
YLTDPWGKEL DEQIEVNYIS DADLKPEESD SYTAGLVYSP SYLDGMSVTL DYWRFKVTNA
IARANTQDGL DACFAGDTAA CDQFNIGAGG DLTNLSNALT NVGSQDTSGI DFNLAYNFEL
IGLDWKVNND TTYLVKFEQD GEEYTGTIDG NFGAYARVRN NFSISAGQDD WNVMYFNRFI
GDMRDLSKGY NVGDILYHNI SGTYHINDMA TISFGVKNFT DEKPLTVSNG SDGGTVPEVY
DTIGRTIYGG VTVKF
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