Gene Shewmr7_2073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2073 
Symbol 
ID4257238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2444157 
End bp2445284 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content47% 
IMG OID638122741 
Productpeptidase M14, carboxypeptidase A 
Protein accessionYP_738118 
Protein GI114047568 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2866] Predicted carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0474309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00159664 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGGATCA GTGCCAATTT TGATGGCGGA AATATCCAAG TCATTAATCT TGATAATAAA 
GACGATATTC AACTGGCAAT CCGTCCCGAT GCGGGCGGTG AGTTTTATCA ATGGTTCAAC
TTCCGATTCG AAGGTGAGGT GGGTAATCAA TACACCTTAA ATATCATCAA TGCTGGCACG
GCTTCCTATC CTAAGGGCTG GCAAGATTAT CACGCGGTTG CCAGTTACGA TCGCCAACAT
TGGTTCCGTG TGCCAACCCA ATATATCGAC GGCAAACTGA GCATTCAGTT AGCGCTTGAT
TGTGATGCGA TTCAAATCGC ATACTTTGCG CCCTACAGCT ATGAGCGTCA TTTAGATCTT
CTCAGCAACG CACAATTGCA TCCCGATGTT AATCTTGATC ATTTAGGCCT GACCTTAGAT
GGCCGTGATA TCACCCTGAT GAAAGTGGGC GATGGCAATC CTGATAAACG CAATATTTGG
ATCACCGCAA GGCAACATCC CGGTGAAACC ATGGCGGAAT GGTTAGTCGA AGGCTTAGTG
AATCGTTTGC TGGATAATGA TTGTCCAGCG GCAAAAGCGT TGCTCGATAA AGCAAATTTC
TACATAGTGC CTAACATGAA CCCGGATGGC AGCGTAAGAG GTCATCTGCG TACCAATGCG
ATTGGGGTTA ACCTTAACCG TGAATGGCAA GCCCCGAGCG TAGAAAGAAG CCCTGAGGTC
TACCATGTAG TGCATAAGAT GCAGCAAACG GGCGTCGATT TATTTTACGA TGTCCATGGT
GATGAAGGTC TGCCCTATGT ATTCCTCGCG GGTTGTGAGG GGGTGCCAGC TTACAATGAG
CGATTGGCGC AGCTGCAAGC TGACTTTAGT CAGGCATTAA CCCTAGCTAG CGCAGATTTC
CAAACCGAAT TTGGTTACGC CAAAGATGAG CCAGGTCAAG CCAATCTGAC CGTGGCCTCT
AATTGGGTAG CGCAATCCTT CGACTGTTTG TCTAACACCT TAGAAATGCC ATTTAAAGAC
AATAACAACC TGCAGGATCC GTTTGTGGGT TGGTCACCAG AGCGCAGCAT TTATTTAGGC
GAAGCGTCAT TAATTGCCAT GCTTGCCGTG GTTGATAAGT TAAGATAG
 
Protein sequence
MRISANFDGG NIQVINLDNK DDIQLAIRPD AGGEFYQWFN FRFEGEVGNQ YTLNIINAGT 
ASYPKGWQDY HAVASYDRQH WFRVPTQYID GKLSIQLALD CDAIQIAYFA PYSYERHLDL
LSNAQLHPDV NLDHLGLTLD GRDITLMKVG DGNPDKRNIW ITARQHPGET MAEWLVEGLV
NRLLDNDCPA AKALLDKANF YIVPNMNPDG SVRGHLRTNA IGVNLNREWQ APSVERSPEV
YHVVHKMQQT GVDLFYDVHG DEGLPYVFLA GCEGVPAYNE RLAQLQADFS QALTLASADF
QTEFGYAKDE PGQANLTVAS NWVAQSFDCL SNTLEMPFKD NNNLQDPFVG WSPERSIYLG
EASLIAMLAV VDKLR