Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2073 |
Symbol | |
ID | 4257238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2444157 |
End bp | 2445284 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638122741 |
Product | peptidase M14, carboxypeptidase A |
Protein accession | YP_738118 |
Protein GI | 114047568 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2866] Predicted carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0474309 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00159664 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGGATCA GTGCCAATTT TGATGGCGGA AATATCCAAG TCATTAATCT TGATAATAAA GACGATATTC AACTGGCAAT CCGTCCCGAT GCGGGCGGTG AGTTTTATCA ATGGTTCAAC TTCCGATTCG AAGGTGAGGT GGGTAATCAA TACACCTTAA ATATCATCAA TGCTGGCACG GCTTCCTATC CTAAGGGCTG GCAAGATTAT CACGCGGTTG CCAGTTACGA TCGCCAACAT TGGTTCCGTG TGCCAACCCA ATATATCGAC GGCAAACTGA GCATTCAGTT AGCGCTTGAT TGTGATGCGA TTCAAATCGC ATACTTTGCG CCCTACAGCT ATGAGCGTCA TTTAGATCTT CTCAGCAACG CACAATTGCA TCCCGATGTT AATCTTGATC ATTTAGGCCT GACCTTAGAT GGCCGTGATA TCACCCTGAT GAAAGTGGGC GATGGCAATC CTGATAAACG CAATATTTGG ATCACCGCAA GGCAACATCC CGGTGAAACC ATGGCGGAAT GGTTAGTCGA AGGCTTAGTG AATCGTTTGC TGGATAATGA TTGTCCAGCG GCAAAAGCGT TGCTCGATAA AGCAAATTTC TACATAGTGC CTAACATGAA CCCGGATGGC AGCGTAAGAG GTCATCTGCG TACCAATGCG ATTGGGGTTA ACCTTAACCG TGAATGGCAA GCCCCGAGCG TAGAAAGAAG CCCTGAGGTC TACCATGTAG TGCATAAGAT GCAGCAAACG GGCGTCGATT TATTTTACGA TGTCCATGGT GATGAAGGTC TGCCCTATGT ATTCCTCGCG GGTTGTGAGG GGGTGCCAGC TTACAATGAG CGATTGGCGC AGCTGCAAGC TGACTTTAGT CAGGCATTAA CCCTAGCTAG CGCAGATTTC CAAACCGAAT TTGGTTACGC CAAAGATGAG CCAGGTCAAG CCAATCTGAC CGTGGCCTCT AATTGGGTAG CGCAATCCTT CGACTGTTTG TCTAACACCT TAGAAATGCC ATTTAAAGAC AATAACAACC TGCAGGATCC GTTTGTGGGT TGGTCACCAG AGCGCAGCAT TTATTTAGGC GAAGCGTCAT TAATTGCCAT GCTTGCCGTG GTTGATAAGT TAAGATAG
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Protein sequence | MRISANFDGG NIQVINLDNK DDIQLAIRPD AGGEFYQWFN FRFEGEVGNQ YTLNIINAGT ASYPKGWQDY HAVASYDRQH WFRVPTQYID GKLSIQLALD CDAIQIAYFA PYSYERHLDL LSNAQLHPDV NLDHLGLTLD GRDITLMKVG DGNPDKRNIW ITARQHPGET MAEWLVEGLV NRLLDNDCPA AKALLDKANF YIVPNMNPDG SVRGHLRTNA IGVNLNREWQ APSVERSPEV YHVVHKMQQT GVDLFYDVHG DEGLPYVFLA GCEGVPAYNE RLAQLQADFS QALTLASADF QTEFGYAKDE PGQANLTVAS NWVAQSFDCL SNTLEMPFKD NNNLQDPFVG WSPERSIYLG EASLIAMLAV VDKLR
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