| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2055 |
|---|
| Symbol | cmk |
|---|
| ID | 4255926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 2422117 |
|---|
| End bp | 2422809 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638122723 |
|---|
| Product | cytidylate kinase |
|---|
| Protein accession | YP_738100 |
|---|
| Protein GI | 114047550 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0283] Cytidylate kinase |
|---|
| TIGRFAM ID | [TIGR00017] cytidylate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000628627 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000241467 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAC GGGCTCCTGT AGTCACAATC GACGGCCCAA GTGGTGCTGG TAAAGGGACA
ATTAGCCAAT TATTGGCTAA GCATCTTGGA TGGCAACTGC TTGATAGTGG TGCTATTTAC
CGAGTGCTTG CGTTAGCTGC AATTCACCAC GATGTAGAAC TGGAAAATGA AGAATCCATC
ACACTCCTTG CTGCGCACCT TGATGTGAAA TTTTTAACCG GCAACGAGAA AGACCCAGTT
CAAGTGATCT TAGAAGGTGA AGACGTCACT ACTGCGATAC GTACTCAAGA ATGCTCAAAT
GCGGCCTCTA AAGTGGCGGC ATTTCCCCGT GTACGGGAAG CCTTATTACG CCGTCAACGT
GCCTTTAGAG CTGCACCTGG ATTAATCGCC GATGGCCGCG ACATGGGCAC GGTTGTTTTC
CCAACGGCAT CGGCTAAATT ATATTTAACT GCTTCTGCAG AGGAGCGAGC TCAAAGACGC
TATAATCAGT TGCAGGACAA GGGCTTCGAT GTTAATATCG AGCGCCTTTT AGCTGAAATT
ATCGAACGTG ACGACCGTGA TATGAATCGT CCAGTGGCCC CTTTGGTCCC TGCCGAGGAT
GCGCTTGTTA TCGATACAAG TGATAAAGGT ATTGATGAAG TACTTGAGCT TGCGCTCAAC
TACATCAACC AAAAATTATC CATAGCTAAC TAA
|
|---|
| Protein sequence | MSERAPVVTI DGPSGAGKGT ISQLLAKHLG WQLLDSGAIY RVLALAAIHH DVELENEESI
TLLAAHLDVK FLTGNEKDPV QVILEGEDVT TAIRTQECSN AASKVAAFPR VREALLRRQR
AFRAAPGLIA DGRDMGTVVF PTASAKLYLT ASAEERAQRR YNQLQDKGFD VNIERLLAEI
IERDDRDMNR PVAPLVPAED ALVIDTSDKG IDEVLELALN YINQKLSIAN
|
|---|
| |