| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2025 |
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| Symbol | |
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| ID | 4258625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2385654 |
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| End bp | 2387033 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638122692 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_738071 |
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| Protein GI | 114047521 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0331062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.321717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCATT CAGGCTTTCA GGCCAAACGC TTAATTCAAC TCGCACTCCC AGTGTTGATC
GCCCAAGTGA CACAAACCAT GATGGGGTTT ATCGATACTG TCATGGCGGG CCGCGTCAGT
GCTGTCGATA TGGCCGCTGT GGCCGTAGGA ACCAGTCTTT GGTTACCCGC CATCTTATTT
GTCCAAGGGC TGCTGATGGC GTTTACGCCA TTATTTGCCC ATCACAATGG CGCAAATAAT
CAGAAAGCCA TTCAACCGCT GGCGTTTCAA GGCGCTTATC TGGCCTTAAT TGGTGGCCTT
GGGGTGATGG CGTTTCTCGC ATCCGCGCCA CTCGTGCTCA GCCATATGAA TTTAGAGCCC
CAATTGTACA ACTTAACCAT AGGATATATC GACGGTATTT TATGGGGCGC GCCCGCATTT
GTGCTCTACC AGGTATTACG CGGTTGCAGT GAAGGGATTT CTTACACATT ACCGACCATG
ATCATCGGAT TCGTGGGGTT AGCGGTGAAT ATTCCGGCAA ACTATATCTT TATCTATGGC
CATTTCGGCG TGCCTGCCAT GGGCGGCGCC GGTTGTGGTG TCGCGACCGC ACTGGTGTTT
TGGGCCATGT TGATAGCCAT GACAATTTAT ATGCAGTTTC ATAAAAAGTT TGCCGCATTG
GCGCCCTTTA GCCAGTTCCA TCGCCCCGAT TTTGCCACTA TGAAGAAGAT GACGAAGCTT
GGGATGCCGA TTGCGATGGC CCTCTTCTTT GAGGTGAGCC TGTTTGCGAT TATCGCCCTG
CTGCTGGCAC CATTGGGCGC GACTGTGGTG GCCAGCCATC AGATTGCGTT GAACTTCTCC
GCCATAGTAT TTATGTTGCC ACTTTCGATA GGTATTGCCG TCTCGATTCG TATTGGCTAC
TACCTCGGCC GCGATCGTGC GGATATTTCT GCCGTGGTGG CAAAGGTCGG ATTGTGGTTG
GCGCTTTCAT TGGCCTTGTC GACGGCAATC TTAACTGTGT TATTCCGTTT CCAAATCGCC
GAGTTGTATA ACAGCGATCC CGAAGTGGTG GTACTTGCGG GCAGTTTGAT GCTGATGGCC
GCGCTGTATC AATTATCTGA CTCAGTACAG GTGGTCGCCG CCGGCGCCTT GCGTGGATAT
AAAGATACCC GCAGTGCATT TTACATTACC CTGTTCTCCT ATTGGGGGAT CGGCATGACA
TTAGGTTACA CCTTGGCGTA TACCGATTTT ATCGTCCCCG CCATGGGCGC CCATGGTTTT
TGGACCGGGT TAATTGCAGG CCTCACCTCG GCGGCGCTGC TGTTTTTCAT CCGCCTTCGT
TATATTCAAA AGCATGGTGT GCATTTAAGT TTGATTGAAG GCGACAGCGT GCATCACTAA
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| Protein sequence | MNHSGFQAKR LIQLALPVLI AQVTQTMMGF IDTVMAGRVS AVDMAAVAVG TSLWLPAILF
VQGLLMAFTP LFAHHNGANN QKAIQPLAFQ GAYLALIGGL GVMAFLASAP LVLSHMNLEP
QLYNLTIGYI DGILWGAPAF VLYQVLRGCS EGISYTLPTM IIGFVGLAVN IPANYIFIYG
HFGVPAMGGA GCGVATALVF WAMLIAMTIY MQFHKKFAAL APFSQFHRPD FATMKKMTKL
GMPIAMALFF EVSLFAIIAL LLAPLGATVV ASHQIALNFS AIVFMLPLSI GIAVSIRIGY
YLGRDRADIS AVVAKVGLWL ALSLALSTAI LTVLFRFQIA ELYNSDPEVV VLAGSLMLMA
ALYQLSDSVQ VVAAGALRGY KDTRSAFYIT LFSYWGIGMT LGYTLAYTDF IVPAMGAHGF
WTGLIAGLTS AALLFFIRLR YIQKHGVHLS LIEGDSVHH
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