Gene Shewmr7_2022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2022 
Symbol 
ID4258622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2384188 
End bp2384571 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content50% 
IMG OID638122689 
Producthypothetical protein 
Protein accessionYP_738068 
Protein GI114047518 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000263083 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.117639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCAGT CATTTAACGC ACCTACGCTA TGCGCGTTAA ATGATTGCGG GTGGGTTGGA 
GGTTTACCTC CACGCATACC GCGCAGTCGC ATCGCTGTAA ATAATGAAGC CAAAGGAGTT
GGTATGTTCA CGAGTATCCT GTTGACGGTT GCACTTAGCC AAGTCGCCCA GAACCCAATC
CCAGTTAGTC CTACGCCACC TACTCAACCT GAACCCCGAG CAGTTCAACG CCAAGCGGTG
CAATTCGACG CCATTGGTTT ACAATCCGAT ATCCACGCCG AGCTTTTGCT GCAGATAGAA
CAGCTATCGC AGGCCATTAG TAACAATATA GAGGAAGGCA TATTACCGAC GGCGCCTGTC
GAACTGATGA CTGTAAAGGA TTGA
 
Protein sequence
MWQSFNAPTL CALNDCGWVG GLPPRIPRSR IAVNNEAKGV GMFTSILLTV ALSQVAQNPI 
PVSPTPPTQP EPRAVQRQAV QFDAIGLQSD IHAELLLQIE QLSQAISNNI EEGILPTAPV
ELMTVKD