Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2022 |
Symbol | |
ID | 4258622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2384188 |
End bp | 2384571 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638122689 |
Product | hypothetical protein |
Protein accession | YP_738068 |
Protein GI | 114047518 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000263083 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.117639 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGCAGT CATTTAACGC ACCTACGCTA TGCGCGTTAA ATGATTGCGG GTGGGTTGGA GGTTTACCTC CACGCATACC GCGCAGTCGC ATCGCTGTAA ATAATGAAGC CAAAGGAGTT GGTATGTTCA CGAGTATCCT GTTGACGGTT GCACTTAGCC AAGTCGCCCA GAACCCAATC CCAGTTAGTC CTACGCCACC TACTCAACCT GAACCCCGAG CAGTTCAACG CCAAGCGGTG CAATTCGACG CCATTGGTTT ACAATCCGAT ATCCACGCCG AGCTTTTGCT GCAGATAGAA CAGCTATCGC AGGCCATTAG TAACAATATA GAGGAAGGCA TATTACCGAC GGCGCCTGTC GAACTGATGA CTGTAAAGGA TTGA
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Protein sequence | MWQSFNAPTL CALNDCGWVG GLPPRIPRSR IAVNNEAKGV GMFTSILLTV ALSQVAQNPI PVSPTPPTQP EPRAVQRQAV QFDAIGLQSD IHAELLLQIE QLSQAISNNI EEGILPTAPV ELMTVKD
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