Gene Shewmr7_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2005 
Symbol 
ID4258691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2369396 
End bp2369752 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content50% 
IMG OID638122672 
ProductDsrE family protein 
Protein accessionYP_738051 
Protein GI114047501 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2923] Uncharacterized protein involved in the oxidation of intracellular sulfur 
TIGRFAM ID[TIGR03010] sulfur relay protein TusC/DsrF 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0519969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000302013 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAA TCTGTATATT GTTCCGAAGC GCGCCCCATG GCACCACTAA GGGCCGCGAA 
GCCTTAGACT TTGCCCTGTT AAGCGCCAGC TTTGAGCAAG AAGTGAGTCT AGTGTTTGTC
GATGAAGGCG TGCTACATCT GCTAAAAGAC CAACAACCCG AGCTTATCGG CGGTAAAGAT
TACCTCGCGG CGCTAAAAGC GCTCCCGCTG TACGACATCG AATCAGTGTT CGCCTGCAAA
CAGTCCTTAG GGGACTACGG CTTAAGCCAT GGCCTGCTGT CGATTCCGGT GACTATCTTA
AACGATGAAG CCATCTCGGC TCACTTAAAA GCCGTCGATG AGGTCTTAGT ATTCTAA
 
Protein sequence
MKKICILFRS APHGTTKGRE ALDFALLSAS FEQEVSLVFV DEGVLHLLKD QQPELIGGKD 
YLAALKALPL YDIESVFACK QSLGDYGLSH GLLSIPVTIL NDEAISAHLK AVDEVLVF