Gene Shewmr7_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2000 
Symbol 
ID4258686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2364867 
End bp2365262 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content44% 
IMG OID638122666 
Producttransposase 
Protein accessionYP_738046 
Protein GI114047496 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.683542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00023796 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAACAT CAATTAACTC AAGCCGTAAG CGCACACAAC GAGATTACAC CTTAGCCTTT 
AAATTAGGCG TTGTAGAGCG TGTTGAAAAA GGCGAAATGA CGTACAAACA AGCCCAAGCT
CGTTTTGGTA TTCAAGGCCG TTCAACCGTA CTCGTTTGGC TTAGAAAACA TGGTAGACTC
GATTGGTCGA AACCTTTTCA GCATCCCCTT ATGCCTAAGT CAAAAGAAAC CCCTGCCGAA
ACGATCAAGC GCCTTGAACG TGAATTAGCA GAAGAGAAAC TGCGTAACCA AATCCTCAAT
GGCATGGTTG ATATCATGGA CAATGAATAT GGAGCAGGCC TCAGAAAAAA GTACTTATCC
GGTACGTCTG GCAAGCAAAA AGCAACGGCG AAATAA
 
Protein sequence
MTTSINSSRK RTQRDYTLAF KLGVVERVEK GEMTYKQAQA RFGIQGRSTV LVWLRKHGRL 
DWSKPFQHPL MPKSKETPAE TIKRLERELA EEKLRNQILN GMVDIMDNEY GAGLRKKYLS
GTSGKQKATA K