Gene Shewmr7_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1993 
Symbol 
ID4256621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2357458 
End bp2358174 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content47% 
IMG OID638122659 
ProductGntR family transcriptional regulator 
Protein accessionYP_738039 
Protein GI114047489 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000185576 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000207183 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCAAATC AGGCAAATAA CCGTCCGCAG AATATCCATA ACTGGGTGGC AAGCGAATTA 
GGTTCTCGCA TTGTGGGCGG CTTTTATGCG CCAGGTGAAT ATATCCCTAA TGAAAATGCT
ATCTGTGAAG AGCTGGAAGT GTCACGCACT TCCTTAAGGG AAGCCTTTAA GGTGCTCACG
GCAAAAGGGC TTATTGAATC TCGTCCTAAA CTTGGCACCC GCATTCGTGA GCGTCGCCAC
TGGAATATGT TCGATCCGGT GATCTTAAAC TGGTTTTCCC AATCTAAACC TTCGCCCGAG
TTTTACACTT CTCTCTATGA AATCCGTGAA GTGTTTGAAC CCGCAGCAGC GGAACTGGCG
GCGAAAAAAC GCACCCCTGA GCAGCTTGAG GTGATTGCGG CGGCTTATGC CAAGATGGAA
GCGGCCGAAT TAGGTACAGA TGAAGTCTAT ACCTCGGATA TCGATTTCCA CATGGCGATT
TTAGATGCGA CCAATAACGA GTTTATGGTG TCCCTCGGCG TGTCGATCCA ATCTGCGCTG
CTCGAAATCT TTAGACTCAG TAGTACAATT CAGGATGACT TTATCCAATC ACTCCCAGGC
CATAAGGCCA TTTATACTGC GATTGCCGCA GGGGACAGTG AAGGGGCGAA AGCCGAGATG
AATAAATTAC TCTCAACGTC TCAAGATACA GTGCATAAAA ATATTGAGCG TAAATAA
 
Protein sequence
MANQANNRPQ NIHNWVASEL GSRIVGGFYA PGEYIPNENA ICEELEVSRT SLREAFKVLT 
AKGLIESRPK LGTRIRERRH WNMFDPVILN WFSQSKPSPE FYTSLYEIRE VFEPAAAELA
AKKRTPEQLE VIAAAYAKME AAELGTDEVY TSDIDFHMAI LDATNNEFMV SLGVSIQSAL
LEIFRLSSTI QDDFIQSLPG HKAIYTAIAA GDSEGAKAEM NKLLSTSQDT VHKNIERK